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Xiao committed Sep 28, 2022
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4 changes: 2 additions & 2 deletions pipeline.sh
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Expand Up @@ -84,8 +84,8 @@ python basicML_allpca.py adab allGenes_pca.pkl 1.0 adab_allpca_1.0
python basicML_allpca.py lr allGenes_pca.pkl 1.0 lr_allpca_1.0
python basicML_allpca.py svm allGenes_pca.pkl 1.0 svm_allpca_1.0

################## Step 8. Determining genes decisive for classification ###################
#see select_core_genes.ipynb
################## Step 8. Determining core genes decisive for classification ###################
#see select_core_genes_for_classification.ipynb

################## Step 9. Determining "non-additive" genes ###################
python select_nonadditive_genes.py
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