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seqkit 2.8.0 #165818

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merged 2 commits into from
Mar 11, 2024
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seqkit 2.8.0 #165818

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ae591ba
seqkit 2.8.0
BrewTestBot Mar 11, 2024
16ced24
seqkit: update 2.8.0 bottle.
chenrui333 Mar 11, 2024
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28 changes: 14 additions & 14 deletions Formula/s/seqkit.rb
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Original file line number Diff line number Diff line change
@@ -1,33 +1,33 @@
class Seqkit < Formula
desc "Cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang"
homepage "https://bioinf.shenwei.me/seqkit"
url "https://github.com/shenwei356/seqkit/archive/refs/tags/v2.7.0.tar.gz"
sha256 "b5c723ffd4640659860fc70a71c218d8f53bea0eae571cecc98eff04c7291e02"
url "https://github.com/shenwei356/seqkit/archive/refs/tags/v2.8.0.tar.gz"
sha256 "260ff3d483965b15071f4632f9f9c35ca335ebebbd74aa3322ecc37a999be7fe"
license "MIT"
head "https://github.com/shenwei356/seqkit.git", branch: "master"

bottle do
sha256 cellar: :any_skip_relocation, arm64_sonoma: "220332904e4a88963670a8735c24e3be0d3725fb6ec5c061952d3135b6193692"
sha256 cellar: :any_skip_relocation, arm64_ventura: "1a09c4f4ea47fc402958ff04c96174d21e5bc480ef30bcea50a58240e9a710ef"
sha256 cellar: :any_skip_relocation, arm64_monterey: "1445b55643ef2e37de8892593c3eb53af8cae1bf7481ba8a595632812721a484"
sha256 cellar: :any_skip_relocation, sonoma: "a09ee8e2d45639f4b8c7017901c5a45a90121cd7b9a0ca6f03c1b6550c29ae18"
sha256 cellar: :any_skip_relocation, ventura: "e90d3620ddeb5e847f6c1d3d030a03c82a2a542f726c49aec42a1674107dc8b2"
sha256 cellar: :any_skip_relocation, monterey: "b01e97e77b9be247f2a7c64a0b3ba9081553bb0d6af081c32fce8a5dd7590cc3"
sha256 cellar: :any_skip_relocation, x86_64_linux: "485c59a26fa5d09874aa047d946c2f0fe6f7cedb6fdea0a9e23781eaefb4222c"
sha256 cellar: :any_skip_relocation, arm64_sonoma: "e57c507876b8904f066909d3d3e733c22db522698408d11ece06bf34564156a2"
sha256 cellar: :any_skip_relocation, arm64_ventura: "4cb5765855a07dce5b551f9939481e5fa4b29fb91b2ef53843c35dad6434f555"
sha256 cellar: :any_skip_relocation, arm64_monterey: "4d72afab3afbd04f58647c3c20d0e2a96b82fe5ddd2715984242467b72e86a02"
sha256 cellar: :any_skip_relocation, sonoma: "124c29527f79c53260f8ca7337d673ff89ecce7c82149d0367ee95aaa09e3df6"
sha256 cellar: :any_skip_relocation, ventura: "2c3225241e0556804faea50b8d1721f2a587ed98e22feb81d121729248b18e66"
sha256 cellar: :any_skip_relocation, monterey: "d874a2e94ccee427d803563543cb46bf0f55ea29442d0c336ae3f0ed65e16d5c"
sha256 cellar: :any_skip_relocation, x86_64_linux: "9a50ea0f58e3820372221637e0fe7a09c5d93ccfe1b5632359694092a0493ab9"
end

depends_on "go" => :build

resource "homebrew-testdata" do
url "https://raw.githubusercontent.com/shenwei356/seqkit/e37d70a7e0ca0e53d6dbd576bd70decac32aba64/tests/seqs4amplicon.fa"
sha256 "b0f09da63e3c677cc698d5cdff60e2d246368263c22385937169a9a4c321178a"
end

def install
system "go", "build", *std_go_args(ldflags: "-s -w"), "./seqkit"
end

test do
resource "homebrew-testdata" do
url "https://raw.githubusercontent.com/shenwei356/seqkit/e37d70a7e0ca0e53d6dbd576bd70decac32aba64/tests/seqs4amplicon.fa"
sha256 "b0f09da63e3c677cc698d5cdff60e2d246368263c22385937169a9a4c321178a"
end

resource("homebrew-testdata").stage do
assert_equal ">seq1\nCCCACTGAAA",
shell_output("#{bin}/seqkit amplicon --quiet -F CCC -R TTT seqs4amplicon.fa").strip
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