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Merging dev into main #11

Merged
merged 8 commits into from
Apr 8, 2024
Merged

Merging dev into main #11

merged 8 commits into from
Apr 8, 2024

Commits on Jan 12, 2024

  1. feat: tfkmers. If strand undefined, extract both extremities

    @mlorthiois
    mlorthiois committed Jan 12, 2024
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  2. feat: if strand undefined, restrand correct strand based on tfkmers prob

    @mlorthiois
    mlorthiois committed Jan 12, 2024
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Commits on Jan 13, 2024

  1. fix: forget to lowercase the record tx_id when restranding

    @mlorthiois
    mlorthiois committed Jan 13, 2024
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  2. Merge pull request #10 from IGDRion/main 

    Recovers delay on "main
    @mlorthiois
    mlorthiois authored Jan 13, 2024
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  3. fix: handle case when gtf record does not have tx_id

    @mlorthiois
    mlorthiois committed Jan 13, 2024
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Commits on Jan 15, 2024

  1. fix: problem with tx_id in lowercase

    @mlorthiois
    mlorthiois committed Jan 15, 2024
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Commits on Jan 20, 2024

  1. feat: add lower prob strand if multiple extremities tested

    @mlorthiois
    mlorthiois committed Jan 20, 2024
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Commits on Mar 13, 2024

  1. Add 'stranded' information in header.nf to display it in output

    @vlebars
    vlebars authored Mar 13, 2024
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