Data updates to 2022 FAOSTAT along with BYU and PCe processing update… #59

	name: test_coverage

	on:
	push:
	branches:
	- main

	jobs:
	test:
	runs-on: ubuntu-latest
	strategy:
	matrix:
	r-version: ['4.1.0']


	env:
	R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
	GITHUB_PAT: ${{ secrets.GH_PAT}}

	steps:
	- name: Checkout code
	uses: actions/checkout@v2

	- name: Set up R ${{ matrix.r-version }}
	uses: r-lib/actions/setup-r@v2-branch
	with:
	r-version: ${{ matrix.r-version }}

	- name: Set up pandoc
	uses: r-lib/actions/setup-pandoc@v1

	- name: Set up TinyTeX
	uses: r-lib/actions/setup-tinytex@v2-branch

	- name: Cache R packages
	uses: actions/cache@v2
	with:
	path: ${{ env.R_LIBS_USER }}
	key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}
	restore-keys: ${{ runner.os }}-

	- name: Ubuntu config
	run: \|
	sudo add-apt-repository ppa:ubuntugis/ppa
	sudo apt-get update
	sudo apt-get install -y libcurl4-openssl-dev libssl-dev libxml2-dev libudunits2-dev libgdal-dev libgeos-dev libproj-dev libmagick++-dev libavfilter-dev

	- name: Install dependencies
	run: \|
	install.packages(c("remotes","rcmdcheck"), repos = "https://cloud.r-project.org")
	remotes::install_deps(dependencies = TRUE)
	shell: Rscript {0}

	- name: Test coverage
	run: \|
	Rscript -e "remotes::install_cran('covr')"
	Rscript -e "covr::codecov(token = Sys.getenv('CODECOV_TOKEN'))"

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