OMIM GeneMap2.txt phenotypes extracter :

This is a simple script to parse the genemap2.txt file and extract MIM phenotypes associated to each genes. Input file can be downloaded from OMIM Downloads(registration required).

This script is based on fschiettecatte's work (https://github.com/fschiettecatte/omim-genemap2-parser).

Usage (Powershell) : cat .\genemap2.txt | python.exe .\Genemap2ToPheno.py > output.txt