reduce duration of dFBA / NRM test run

KarrLab · Jan 4, 2021 · 428c8be · 428c8be
1 parent 161a364
commit 428c8be
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/tests/submodels/test_multiple_submodels.py b/tests/submodels/test_multiple_submodels.py
@@ -92,8 +92,8 @@ def test_run_submodel(self):
         print(f'Reactants in dfba_obj_reactions that lack initial concentrations:')
         print('\n'.join(sorted_reactant_ids))
 
-        N = 2
-        max_time = 100    # 3 * 60 * 60
+        N = 1
+        max_time = 50    # 3 * 60 * 60
         seeds = [17, 19, 23, 29, 31]
         dfba_options = dict(options=dict(presolve='on',
                                          verbosity='status'))

diff --git a/wc_sim/submodels/dfba.py b/wc_sim/submodels/dfba.py
@@ -734,7 +734,7 @@ def run_fba_solver(self):
 
         if self._model_dumps % 100 == 0:
             print()
-            print(f'--- {self.time}: solution ---')
+            print(f'--- time {self.time}: solution ---')
             non_zero_fluxes = [f for f in self.reaction_fluxes.values() if 0 < f]
             print(f'{len(non_zero_fluxes)} non-zero reaction fluxes')
             for rxn_id, flux in self.reaction_fluxes.items():