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Refactor kinship to allow other code to initiate import directly #730

Merged
merged 11 commits into from
Mar 12, 2024
Merged

Refactor kinship to allow other code to initiate import directly #730

merged 11 commits into from
Mar 12, 2024

Commits on Feb 28, 2024

  1. Refactor genetics pipeline to allow standalone import of TSVs that we… 

    …re calculated separately
    @bbimber
    bbimber committed Feb 28, 2024
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  2. Improve R scripts: 

    - Make R scripts exit immediately on error
- Bugfix to expected kinship/validation
    @bbimber
    bbimber committed Feb 28, 2024
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  3. Add action to allow external server to trigger re-import of externall… 

    …y computed kinship data
    @bbimber
    bbimber committed Feb 28, 2024
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  4. Correct typos

    @bbimber
    bbimber committed Feb 28, 2024
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  5. Minor cleanup

    @bbimber
    bbimber committed Feb 28, 2024
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  6. - Refactor kinship script to further reduce memory 

    - Refactor kinship script to optionally merge species where hybrids are present and process together
    @bbimber
    bbimber committed Feb 28, 2024
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  7. Avoid another fringe kinship case

    @bbimber
    bbimber committed Feb 28, 2024
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  8. Add setting to control whether kinship import is allowed during busin… 

    …ess hours
    @bbimber
    bbimber committed Feb 28, 2024
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  9. Back out some changes not directly related to remote kinship execution

    @bbimber
    bbimber committed Feb 28, 2024
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  10. Minor script cleanup

    @bbimber
    bbimber committed Feb 28, 2024
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Commits on Mar 11, 2024

  1. Code review

    @bbimber
    bbimber committed Mar 11, 2024
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