-
Notifications
You must be signed in to change notification settings - Fork 0
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Add source-related files for gffread/0.12.7
- Loading branch information
1 parent
b41822e
commit 565f3a5
Showing
2 changed files
with
45 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1 @@ | ||
gffread-0.12.7.Linux_x86_64 |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,44 @@ | ||
# Installation | ||
|
||
```bash | ||
## Commands used for installing the software | ||
wget https://github.com/gpertea/gffread/releases/download/v0.12.7/gffread-0.12.7.Linux_x86_64.tar.gz | ||
tar -xzf gffread-0.12.7.Linux_x86_64.tar.gz | ||
rm gffread-0.12.7.Linux_x86_64.tar.gz | ||
|
||
chmod -R 775 . | ||
|
||
## Ignore all downloaded/installed files | ||
echo "gffread-0.12.7.Linux_x86_64" > .gitignore | ||
|
||
## Version control files | ||
git add .gitignore | ||
git add README.md | ||
``` | ||
|
||
# Reproducibility | ||
|
||
```bash | ||
## Evaluate the following commands | ||
module list | ||
date | ||
echo "User: ${USER}" | ||
echo "Node name: ${SLURMD_NODENAME}" | ||
``` | ||
|
||
```bash | ||
## copy paste the output from the previous commands | ||
$ module list | ||
|
||
Currently Loaded Modules: | ||
1) JHPCE_tools/3.0 2) htslib/1.18 | ||
|
||
|
||
|
||
$ date | ||
Tue Aug 29 03:15:54 PM EDT 2023 | ||
$ echo "User: ${USER}" | ||
User: neagles | ||
$ echo "Node name: ${SLURMD_NODENAME}" | ||
Node name: compute-113 | ||
``` |