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Add bs v1.3.0 from https://developer.basespace.illumina.com/docs/cont…
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bin |
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# Installation | ||
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Instructions: https://developer.basespace.illumina.com/docs/content/documentation/cli/cli-overview | ||
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```bash | ||
## Commands used for installing the software | ||
mkdir bin | ||
wget "https://api.bintray.com/content/basespace/BaseSpaceCLI-EarlyAccess-BIN/latest/\$latest/amd64-linux/bs?bt_package=latest" -O bin/bs | ||
chmod -R 755 bin | ||
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./bin/bs --version | ||
BaseSpaceCLI 1.3.0 -- built on 2021-02-16 at 19:18 | ||
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## Ignore all downloaded/installed files | ||
echo "bin" > .gitignore | ||
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## Version control files | ||
git add .gitignore | ||
git add README.md | ||
``` | ||
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# Reproducibility | ||
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```bash | ||
## Evaluate the following commands | ||
module list | ||
date | ||
echo "User: ${USER}" | ||
echo "Hostname: ${HOSTNAME}" | ||
``` | ||
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```bash | ||
## copy paste the output from the previous commands | ||
$ module list | ||
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Currently Loaded Modules: | ||
1) matlab/R2019a 4) sge/8.1.9 7) JHPCE_CENTOS7_DEFAULT_ENV 10) git-lfs/2.8.0 13) conda/3-4.6.14 | ||
2) stata/16 5) gcc/4.4.7 8) git-status-size/github 11) ruby/2.6.4p104 14) conda_R/4.0.x | ||
3) JHPCE_tools/1.0 6) COMMUNITY_CENTOS7_DEFAULT_ENV 9) git/2.28.0 12) rmate/1.5.9 | ||
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$ date | ||
Fri Feb 19 11:11:03 EST 2021 | ||
$ echo "User: ${USER}" | ||
User: lcollado | ||
$ echo "Hostname: ${HOSTNAME}" | ||
Hostname: compute-075.cm.cluster | ||
``` |