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Fix: groups.py doctest fixes #4374

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merged 31 commits into from
Mar 29, 2024
Merged

Fix: groups.py doctest fixes #4374

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b7b56cc
Fixed errors in atomicdistances.py
ljwoods2 Dec 15, 2023
3ade422
Removed unused import
ljwoods2 Dec 15, 2023
c279443
Fixed tests in overview.rst
ljwoods2 Dec 15, 2023
245a7ea
Added name to authors per PR feedback
ljwoods2 Dec 15, 2023
986289a
Fixed errors in groups.py
ljwoods2 Dec 19, 2023
1cd741b
flake8 & black reformatting
ljwoods2 Dec 19, 2023
ee8528b
Changed indentation to four spaces
ljwoods2 Dec 20, 2023
a6e2a73
Added username to CHANGELOG
ljwoods2 Dec 17, 2023
f4c3501
Added CHANGELOG entry describing PR
ljwoods2 Dec 17, 2023
e885e43
Revert "Fixed errors in atomicdistances.py"
ljwoods2 Dec 20, 2023
f7ab371
Revert "Removed unused import"
ljwoods2 Dec 20, 2023
c809864
Revert "Fixed tests in overview.rst"
ljwoods2 Dec 20, 2023
bcf5380
Revert "Added name to authors per PR feedback"
ljwoods2 Dec 20, 2023
c292553
Reverting commit from different branch
ljwoods2 Dec 20, 2023
16457f7
Revert "flake8 & black reformatting"
ljwoods2 Dec 20, 2023
9989eb8
Reverting Black format
ljwoods2 Dec 20, 2023
a4db981
Uppdate CHANGELOG
ljwoods2 Dec 20, 2023
ebcf2da
Merge branch 'develop' into groups-doctest-fixes
RMeli Dec 21, 2023
cdfad65
Merge branch 'develop' into groups-doctest-fixes
RMeli Dec 21, 2023
a1682f5
Update README to reflect move to GitHub Discussions (#4375)
RMeli Dec 22, 2023
5bef44e
Adding py3.12 to full dependency CI checks (#4329)
IAlibay Dec 23, 2023
4c936dc
Fix upper python+numpy pin for build system (#4385)
IAlibay Dec 24, 2023
55bc40e
Tie off 2.7.0, add release upper pin (numpy) (#4389)
IAlibay Dec 26, 2023
3b3f220
Update cirrus-deploy.yml (#4392)
IAlibay Dec 26, 2023
f302d84
Update things for 2.8.0-dev0
IAlibay Dec 26, 2023
a1c2615
Update CHANGELOG (#4395)
IAlibay Dec 27, 2023
72dd101
Fix deploy action (#4396)
IAlibay Dec 27, 2023
471e2e7
Updated CHANGELOG
ljwoods2 Dec 29, 2023
e3d534f
Merge branch 'develop' into groups-doctest-fixes
ljwoods2 Jan 2, 2024
fe2298c
Merge branch 'develop' into groups-doctest-fixes
orbeckst Feb 10, 2024
958a149
Merge branch 'develop' into groups-doctest-fixes
orbeckst Mar 25, 2024
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1 change: 1 addition & 0 deletions package/CHANGELOG
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Original file line number Diff line number Diff line change
Expand Up @@ -30,6 +30,7 @@ Fixes
`DistanceMatrix.run(frames=...)` (PR #4433)
* Fix doctest errors of lib/picklable_file_io.py (Issue #3925, PR #4371)
* Fix deploy action to use the correct version of the pypi upload action.
* Fix groups.py doctests using sphinx directives (Issue #3925, PR #4374)

Enhancements
* Improved performance of PDBWriter (Issue #2785, PR #4472)
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