Switch setup configurations to pyproject.toml

setup.cfg → .flake8

@@ -14,21 +14,3 @@ exclude =
     .idea,
     .mypy_cache,
     .pytest_cache,
-
-[isort]
-multi_line_output=3
-include_trailing_comma=True
-force_grid_wrap=0
-use_parentheses=True
-line_length=79
-skip=
-    e3sm_diags/e3sm_diags_driver.py
-
-[pycodestyle]
-max-line-length = 79
-exclude =
-    .git
-    docs
-    .idea
-    .mypy_cache
-    .pytest_cache

.github/workflows/build_workflow.yml

@@ -35,12 +35,20 @@ jobs:
         with:
           python-version: "3.10"
 
+      - if: ${{ steps.skip_check.outputs.should_skip != 'true' }}
+        id: file_changes
+        uses: trilom/[email protected]
+        with:
+          output: ' '
+
       - if: ${{ steps.skip_check.outputs.should_skip != 'true' }}
         # Run all pre-commit hooks on all the files.
         # Getting only staged files can be tricky in case a new PR is opened
         # since the action is run on a branch in detached head state
         name: Install and Run Pre-commit
         uses: pre-commit/[email protected]
+        with:
+          extra_args: --files ${{ steps.file_changes.outputs.files}}
 
   build:
     name: test pyremap - python ${{ matrix.python-version }}
@@ -91,7 +99,7 @@ jobs:
         name: Install pyremap
         run: |
           conda create -n pyremap_dev --file dev-spec.txt \
-              python=${{ matrix.python-version }}
+            python=${{ matrix.python-version }}
           conda activate pyremap_dev
           python -m pip install -vv --no-deps --no-build-isolation .
 
@@ -100,6 +108,6 @@ jobs:
         env:
           CHECK_IMAGES: False
         run: |
-            conda activate pyremap_dev
-            pytest --pyargs pyremap
+          conda activate pyremap_dev
+          pytest --pyargs pyremap
 

.pre-commit-config.yaml

@@ -23,7 +23,7 @@ repos:
     rev: 7.1.1
     hooks:
       - id: flake8
-        args: ["--config=setup.cfg"]
+        args: ["--config=.flake8"]
         additional_dependencies: [flake8-isort]
 
 # https://pre-commit.ci/#configuration

MANIFEST.in

@@ -0,0 +1 @@
+recursive-include pyremap *.nc

pyproject.toml

@@ -0,0 +1,62 @@
+[project]
+name = "pyremap"
+dynamic = ["version"]
+authors = [
+    { name="Xylar Asay-Davis", email="[email protected]" },
+    { name="Althea Denlinger" },
+]
+description = "Python remapping tools for climate and earth system models"
+license = {file = "LICENSE"}
+readme = "README.md"
+requires-python = ">=3.9"
+classifiers = [
+    # these are only for searching/browsing projects on PyPI
+    "Programming Language :: Python :: 3.9",
+    "Programming Language :: Python :: 3.10",
+    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
+    "Programming Language :: Python :: 3.13",
+
+    "License :: OSI Approved :: BSD License",
+    "Operating System :: OS Independent",
+    "Intended Audience :: Science/Research",
+    "Topic :: Scientific/Engineering",
+]
+
+dependencies = [
+    "dask",
+    "netcdf4",
+    "numpy",
+    "pyproj",
+    "scipy",
+    "xarray>=0.10.0",
+]
+
+[tool.isort]
+multi_line_output = "3"
+include_trailing_comma = true
+force_grid_wrap = "0"
+use_parentheses = true
+line_length = "79"
+
+[tool.mypy]
+python_version = "3.10"
+check_untyped_defs = true
+ignore_missing_imports = true
+warn_unused_ignores = true
+warn_redundant_casts = true
+warn_unused_configs = true
+
+[build-system]
+requires = ["setuptools>=60"]
+build-backend = "setuptools.build_meta"
+
+[tool.setuptools.packages.find]
+exclude = ["ci*", "docs*", "licenses*", "examples*"]
+
+[tool.setuptools.dynamic]
+version = { attr = "pyremap.__version__" }
+
+[project.urls]
+Documentation = "https://mpas-dev.github.io/pyremap/stable/"
+"Bug Tracker" = "https://github.com/MPAS-Dev/pyremap/issues"