Merge pull request #65 from MiraGeoscience/DEVOPS-551

DEVOPS-551: add auto-deploy workflows to las-geoh5

.github/workflows/python_deploy_dev.yml

@@ -0,0 +1,31 @@
+name: Deploy python package in development
+
+on:
+  push:
+    tags:
+      - 'v*' # Push events to every version tag (eg. v1.0.0)
+
+jobs:
+  call-workflow-conda-publish:
+    name: Publish development conda package on JFrog Artifactory
+    uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-publish_conda_package.yml@main
+    with:
+      package-name: 'las-geoh5'
+      python-version: '3.10'
+      virtual-repo-names: '["public-conda-dev"]'
+    secrets:
+      JFROG_ARTIFACTORY_URL: ${{ secrets.JFROG_ARTIFACTORY_URL }}
+      JFROG_ARTIFACTORY_TOKEN: ${{ secrets.JFROG_ARTIFACTORY_TOKEN }}
+  call-workflow-pypi-publish:
+    name: Publish development pypi package (JFrog Artifactory and TestPyPI)
+    uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-publish_pypi_package.yml@main
+    with:
+      package-manager: 'poetry'
+      package-name: 'las-geoh5'
+      version-tag: ${{ github.ref_name }}
+      python-version: '3.10'
+      virtual-repo-names: '["public-pypi-dev", "test-pypi"]'
+    secrets:
+      JFROG_ARTIFACTORY_URL: ${{ secrets.JFROG_ARTIFACTORY_URL }}
+      JFROG_ARTIFACTORY_TOKEN: ${{ secrets.JFROG_ARTIFACTORY_TOKEN }}
+      PYPI_TOKEN: ${{ secrets.TEST_PYPI_TOKEN }}

.github/workflows/python_deploy_prod.yml

@@ -0,0 +1,30 @@
+name: Deploy python package in production
+
+on:
+  release:
+    types: [published]
+
+jobs:
+  call-workflow-conda-publish:
+    name: Publish production conda package on JFrog Artifactory
+    uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-publish_conda_package.yml@main
+    with:
+      package-name: 'las-geoh5'
+      python-version: '3.10'
+      virtual-repo-names: '["public-conda-prod"]'
+    secrets:
+      JFROG_ARTIFACTORY_URL: ${{ secrets.JFROG_ARTIFACTORY_URL }}
+      JFROG_ARTIFACTORY_TOKEN: ${{ secrets.JFROG_ARTIFACTORY_TOKEN }}
+  call-workflow-pypi-publish:
+    name: Publish production pypi package (JFrog Artifactory and PyPI)
+    uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-publish_pypi_package.yml@main
+    with:
+      package-manager: 'poetry'
+      package-name: 'las-geoh5'
+      version-tag: ${{ github.ref_name }}
+      python-version: '3.10'
+      virtual-repo-names: '["public-pypi-prod", "pypi"]'
+    secrets:
+      JFROG_ARTIFACTORY_URL: ${{ secrets.JFROG_ARTIFACTORY_URL }}
+      JFROG_ARTIFACTORY_TOKEN: ${{ secrets.JFROG_ARTIFACTORY_TOKEN }}
+      PYPI_TOKEN: ${{ secrets.PYPI_TOKEN }}

.pre-commit-config.yaml

@@ -39,6 +39,7 @@ repos:
             pydantic==2.5.*,
             tomli,  # to read config from pyproject.toml
             types-toml,
+            types-PyYAML,
         ]
         exclude: ^(docs|las_geoh5-assets)/
 -   repo: https://github.com/codingjoe/relint
@@ -78,6 +79,7 @@ repos:
         exclude_types: [jupyter]
     -   id: check-toml
     -   id: check-yaml
+        exclude: ^meta.yaml$
     -   id: check-added-large-files
     -   id: check-case-conflict
     -   id: check-merge-conflict

meta.yaml

@@ -0,0 +1,60 @@
+{% set name = "las-geoh5" %}
+{% set version = "0.3.0a2" %}
+
+package:
+  name: {{ name|lower }}
+  version: {{ version }}
+
+source:
+  # url: https://github.com/MiraGeoscience/{{ name }}/archive/v{{ version }}.tar.gz
+  # sha256: 1c20e6bb021516ef89de8551dc1f47f944bc98ea83d3da393d13e71469add43d
+  path: ../{{ name }}
+
+build:
+  noarch: python
+  script: {{ PYTHON }} -m pip install . -vv --no-deps --no-build-isolation
+  number: 0
+  entry_points:
+    - geoh5_to_las = las_geoh5.scripts.geoh5_to_las:main
+    - las_to_geoh5 = las_geoh5.scripts.las_to_geoh5:main
+
+requirements:
+  host:
+    - pip
+    - python >=3.10.0,<3.11
+    - poetry-core >=1.0.0
+    - setuptools
+    - setuptools_scm
+  run:
+    - python >=3.9.0,<3.11
+    - geoh5py >=0.10.0a1,<0.11.0
+    - lasio >=0.31
+    - numpy >=1.26.0,<1.27.0
+    - pydantic >=2.5.2,<2.6.0
+    - tqdm >=4.66.1,<4.67.0
+
+test:
+  imports:
+    - las_geoh5
+  commands:
+    - pip list
+    - pip check
+  requires:
+    - pip
+
+about:
+  home: https://www.mirageoscience.com/mining-industry-software/python-integration/
+  summary: 'Import/Export LAS files to/from geoh5 format.'
+  description: |
+    Import/Export LAS files to/from geoh5 format.
+    This package allows for import and export of LAS files to and from a drillhole group. There is a module each for import and export operations. Each of these includes a driver and a ui.json that parameterizes the driver and renders a UI for use within Geoscience ANALYST Pro. Read on to learn how to install las-geoh5 and get started importing and exporting LAS files.
+  license: MIT
+  license_file:
+    - LICENSE
+  doc_url: https://mirageoscience-las-geoh5.readthedocs-hosted.com/en/stable/
+  dev_url: https://github.com/MiraGeoscience/las-geoh5
+
+extra:
+  recipe-maintainers:
+    - SophieCurinier
+    - sebhmg

pyproject.toml

@@ -62,6 +62,9 @@ Pygments = "*"
 pylint = "*"
 pytest = "*"
 pytest-cov = "*"
+pyyaml = '*'
+jinja2 = '*'
+packaging = '*'
 tomli = "*"
 sphinx = "*"
 sphinx-autodoc-typehints = "*"

tests/version_test.py

@@ -9,12 +9,46 @@
 from __future__ import annotations
 
 import re
+from pathlib import Path
+
+import tomli as toml
+import yaml
+from jinja2 import Template
+from packaging.version import Version
 
 import las_geoh5
 
 
-def test_version_is_consistent(pyproject: dict):
-    assert las_geoh5.__version__ == pyproject["tool"]["poetry"]["version"]
+def get_version():
+    path = Path(__file__).resolve().parents[1] / "pyproject.toml"
+
+    with open(str(path), encoding="utf-8") as file:
+        pyproject = toml.loads(file.read())
+
+    return pyproject["tool"]["poetry"]["version"]
+
+
+def get_conda_recipe_version():
+    path = Path(__file__).resolve().parents[1] / "meta.yaml"
+
+    with open(str(path), encoding="utf-8") as file:
+        content = file.read()
+
+    template = Template(content)
+    rendered_yaml = template.render()
+
+    recipe = yaml.safe_load(rendered_yaml)
+
+    return recipe["package"]["version"]
+
+
+def test_version_is_consistent():
+    assert las_geoh5.__version__ == get_version()
+
+
+def test_conda_version_is_pep440():
+    version = Version(get_conda_recipe_version())
+    assert version is not None
 
 
 def test_version_is_semver():