Mutation Finder

Assembles a genome and finds true mutations among sequencing errors.

Installation and running

• Download and install Bio-Linux, a specialised Ubuntu workstation (Optional)
• Download the Mutation Finder project
• Compile the project: with an IDE or a makefile (TODO)
• Adjust the settings in the settings.ini file to your liking
• Place the settings.ini file and input files into the same folder
• Run the program with: "./MutationFinder"

Folders

Folder	Contents
Docs:	Project documentation
Instructions:	Faculty provided instructions
MutationFinder:	Project folder
Research:	Research notes
Results:	Output files, mutation CSV files
TestData:	Faculty provided test data

Authors

Josip Kasap
Mislav Jaksic

University, faculty and course

• University/Faculty: University of Zagreb, Faculty of Electrical Engineering and Computing
• Course: Bioinformatics