Non-tagged commit updating dev doc (10638).

NeuroLang · Sep 14, 2023 · 8f8bf3d · 8f8bf3d
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diff --git a/dev/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip b/dev/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip
diff --git a/dev/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip b/dev/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip
diff --git a/dev/_sources/auto_examples/plot_cbma_spatial_prior.rst.txt b/dev/_sources/auto_examples/plot_cbma_spatial_prior.rst.txt
@@ -168,7 +168,7 @@ to be.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 18.018 seconds)
+   **Total running time of the script:** (0 minutes 19.587 seconds)
 
 
 .. _sphx_glr_download_auto_examples_plot_cbma_spatial_prior.py:

diff --git a/dev/_sources/auto_examples/plot_load_destrieux_datalog_ir.rst.txt b/dev/_sources/auto_examples/plot_load_destrieux_datalog_ir.rst.txt
@@ -138,7 +138,7 @@ Load the regions into Voxel-style regions
  .. code-block:: none
 
 
-    <nilearn.plotting.displays.OrthoSlicer object at 0x7fbe5f154760>
+    <nilearn.plotting.displays.OrthoSlicer object at 0x7f276ff46c70>
 
 
 
@@ -718,7 +718,7 @@ and plotting the first element of the result
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (1 minutes 15.596 seconds)
+   **Total running time of the script:** (1 minutes 18.890 seconds)
 
 
 .. _sphx_glr_download_auto_examples_plot_load_destrieux_datalog_ir.py:

diff --git a/dev/_sources/auto_examples/plot_load_destrieux_left_hemisphere_gyri.rst.txt b/dev/_sources/auto_examples/plot_load_destrieux_left_hemisphere_gyri.rst.txt
@@ -192,7 +192,7 @@ Visualise results
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 52.877 seconds)
+   **Total running time of the script:** (0 minutes 53.772 seconds)
 
 
 .. _sphx_glr_download_auto_examples_plot_load_destrieux_left_hemisphere_gyri.py:

diff --git a/dev/_sources/auto_examples/plot_neurosynth_implementation.rst.txt b/dev/_sources/auto_examples/plot_neurosynth_implementation.rst.txt
@@ -264,7 +264,7 @@ Load the NeuroSynth database
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 14.824 seconds)
+   **Total running time of the script:** (0 minutes 14.809 seconds)
 
 
 .. _sphx_glr_download_auto_examples_plot_neurosynth_implementation.py:

diff --git a/dev/_sources/auto_examples/plot_sulcal_queries.rst.txt b/dev/_sources/auto_examples/plot_sulcal_queries.rst.txt
@@ -357,7 +357,7 @@ as a sulcus which:
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 14.473 seconds)
+   **Total running time of the script:** (0 minutes 13.433 seconds)
 
 
 .. _sphx_glr_download_auto_examples_plot_sulcal_queries.py:

diff --git a/dev/_sources/auto_examples/sg_execution_times.rst.txt b/dev/_sources/auto_examples/sg_execution_times.rst.txt
@@ -6,16 +6,16 @@
 
 Computation times
 =================
-**02:55.788** total execution time for **auto_examples** files:
+**03:00.490** total execution time for **auto_examples** files:
 
 +-----------------------------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_auto_examples_plot_load_destrieux_datalog_ir.py` (``plot_load_destrieux_datalog_ir.py``)                     | 01:15.596 | 0.0 MB |
+| :ref:`sphx_glr_auto_examples_plot_load_destrieux_datalog_ir.py` (``plot_load_destrieux_datalog_ir.py``)                     | 01:18.890 | 0.0 MB |
 +-----------------------------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_auto_examples_plot_load_destrieux_left_hemisphere_gyri.py` (``plot_load_destrieux_left_hemisphere_gyri.py``) | 00:52.877 | 0.0 MB |
+| :ref:`sphx_glr_auto_examples_plot_load_destrieux_left_hemisphere_gyri.py` (``plot_load_destrieux_left_hemisphere_gyri.py``) | 00:53.772 | 0.0 MB |
 +-----------------------------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_auto_examples_plot_cbma_spatial_prior.py` (``plot_cbma_spatial_prior.py``)                                   | 00:18.018 | 0.0 MB |
+| :ref:`sphx_glr_auto_examples_plot_cbma_spatial_prior.py` (``plot_cbma_spatial_prior.py``)                                   | 00:19.587 | 0.0 MB |
 +-----------------------------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_auto_examples_plot_neurosynth_implementation.py` (``plot_neurosynth_implementation.py``)                     | 00:14.824 | 0.0 MB |
+| :ref:`sphx_glr_auto_examples_plot_neurosynth_implementation.py` (``plot_neurosynth_implementation.py``)                     | 00:14.809 | 0.0 MB |
 +-----------------------------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_auto_examples_plot_sulcal_queries.py` (``plot_sulcal_queries.py``)                                           | 00:14.473 | 0.0 MB |
+| :ref:`sphx_glr_auto_examples_plot_sulcal_queries.py` (``plot_sulcal_queries.py``)                                           | 00:13.433 | 0.0 MB |
 +-----------------------------------------------------------------------------------------------------------------------------+-----------+--------+
diff --git a/dev/_sources/gen_api/neurolang.exceptions.rst.txt b/dev/_sources/gen_api/neurolang.exceptions.rst.txt
@@ -50,6 +50,7 @@
       SymbolNotFoundError
       TranslateToNamedRAException
       UnexpectedExpressionError
+      UnexpectedTokenError
       UnsupportedProgramError
       UnsupportedQueryError
       UnsupportedSolverError

diff --git a/dev/_static/documentation_options.js b/dev/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: '0.1a13.dev2+g8acac30',
+    VERSION: '0.1a13.dev3+g0d36b00',
     LANGUAGE: 'en',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',

diff --git a/dev/api.html b/dev/api.html
@@ -5,14 +5,14 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>User Guide &#8212; neurolang 0.1a13.dev2+g8acac30 documentation</title>
+    <title>User Guide &#8212; neurolang 0.1a13.dev3+g0d36b00 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
     <link rel="stylesheet" type="text/css" href="_static/bootstrap-sphinx.css?v=284a2d1d" />
     <link rel="stylesheet" type="text/css" href="_static/sg_gallery.css?v=61a4c737" />
     <link rel="stylesheet" type="text/css" href="_static/sg_gallery-binder.css?v=f4aeca0c" />
     <link rel="stylesheet" type="text/css" href="_static/sg_gallery-dataframe.css?v=2082cf3c" />
     <link rel="stylesheet" type="text/css" href="_static/sg_gallery-rendered-html.css?v=1277b6f3" />
-    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js?v=a18caea1"></script>
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js?v=25f98065"></script>
     <script src="_static/doctools.js?v=888ff710"></script>
     <script src="_static/sphinx_highlight.js?v=4825356b"></script>
     <link rel="index" title="Index" href="genindex.html" />
@@ -41,7 +41,7 @@
         </button>
         <a class="navbar-brand" href="index.html">
           neurolang</a>
-        <span class="navbar-text navbar-version pull-left"><b>0.1a13.dev2+g8acac30</b></span>
+        <span class="navbar-text navbar-version pull-left"><b>0.1a13.dev3+g0d36b00</b></span>
       </div>
 
         <div class="collapse navbar-collapse nav-collapse">
@@ -226,7 +226,7 @@ <h2>Indices and tables<a class="headerlink" href="#indices-and-tables" title="Pe
   </div>
 </footer>
 <div class="container neurolang-timestamp">
-    <p style="margin-top: -10px;">on 12 Sep 2023, 14:23:23</p>
+    <p style="margin-top: -10px;">on 14 Sep 2023, 16:34:40</p>
 </div>
   </body>
 </html>
diff --git a/dev/authors.html b/dev/authors.html
@@ -5,14 +5,14 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>People &#8212; neurolang 0.1a13.dev2+g8acac30 documentation</title>
+    <title>People &#8212; neurolang 0.1a13.dev3+g0d36b00 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
     <link rel="stylesheet" type="text/css" href="_static/bootstrap-sphinx.css?v=284a2d1d" />
     <link rel="stylesheet" type="text/css" href="_static/sg_gallery.css?v=61a4c737" />
     <link rel="stylesheet" type="text/css" href="_static/sg_gallery-binder.css?v=f4aeca0c" />
     <link rel="stylesheet" type="text/css" href="_static/sg_gallery-dataframe.css?v=2082cf3c" />
     <link rel="stylesheet" type="text/css" href="_static/sg_gallery-rendered-html.css?v=1277b6f3" />
-    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js?v=a18caea1"></script>
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js?v=25f98065"></script>
     <script src="_static/doctools.js?v=888ff710"></script>
     <script src="_static/sphinx_highlight.js?v=4825356b"></script>
     <link rel="index" title="Index" href="genindex.html" />
@@ -39,7 +39,7 @@
         </button>
         <a class="navbar-brand" href="index.html">
           neurolang</a>
-        <span class="navbar-text navbar-version pull-left"><b>0.1a13.dev2+g8acac30</b></span>
+        <span class="navbar-text navbar-version pull-left"><b>0.1a13.dev3+g0d36b00</b></span>
       </div>
 
         <div class="collapse navbar-collapse nav-collapse">
@@ -182,7 +182,7 @@ <h2>Funding<a class="headerlink" href="#funding" title="Permalink to this headin
   </div>
 </footer>
 <div class="container neurolang-timestamp">
-    <p style="margin-top: -10px;">on 12 Sep 2023, 14:23:23</p>
+    <p style="margin-top: -10px;">on 14 Sep 2023, 16:34:40</p>
 </div>
   </body>
 </html>
diff --git a/dev/auto_examples/index.html b/dev/auto_examples/index.html
@@ -5,14 +5,14 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>Examples of the NeuroLang language environment. &#8212; neurolang 0.1a13.dev2+g8acac30 documentation</title>
+    <title>Examples of the NeuroLang language environment. &#8212; neurolang 0.1a13.dev3+g0d36b00 documentation</title>
     <link rel="stylesheet" type="text/css" href="../_static/pygments.css?v=fa44fd50" />
     <link rel="stylesheet" type="text/css" href="../_static/bootstrap-sphinx.css?v=284a2d1d" />
     <link rel="stylesheet" type="text/css" href="../_static/sg_gallery.css?v=61a4c737" />
     <link rel="stylesheet" type="text/css" href="../_static/sg_gallery-binder.css?v=f4aeca0c" />
     <link rel="stylesheet" type="text/css" href="../_static/sg_gallery-dataframe.css?v=2082cf3c" />
     <link rel="stylesheet" type="text/css" href="../_static/sg_gallery-rendered-html.css?v=1277b6f3" />
-    <script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js?v=a18caea1"></script>
+    <script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js?v=25f98065"></script>
     <script src="../_static/doctools.js?v=888ff710"></script>
     <script src="../_static/sphinx_highlight.js?v=4825356b"></script>
     <link rel="index" title="Index" href="../genindex.html" />
@@ -41,7 +41,7 @@
         </button>
         <a class="navbar-brand" href="../index.html">
           neurolang</a>
-        <span class="navbar-text navbar-version pull-left"><b>0.1a13.dev2+g8acac30</b></span>
+        <span class="navbar-text navbar-version pull-left"><b>0.1a13.dev3+g0d36b00</b></span>
       </div>
 
         <div class="collapse navbar-collapse nav-collapse">
@@ -179,7 +179,7 @@ <h1>Examples of the NeuroLang language environment.<a class="headerlink" href="#
   </div>
 </footer>
 <div class="container neurolang-timestamp">
-    <p style="margin-top: -10px;">on 12 Sep 2023, 14:23:23</p>
+    <p style="margin-top: -10px;">on 14 Sep 2023, 16:34:40</p>
 </div>
   </body>
 </html>
diff --git a/dev/auto_examples/plot_cbma_spatial_prior.html b/dev/auto_examples/plot_cbma_spatial_prior.html
@@ -5,14 +5,14 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>Example where a spatial prior is defined based on the distance between voxels and foci in a coordinate-based meta-analysis database &#8212; neurolang 0.1a13.dev2+g8acac30 documentation</title>
+    <title>Example where a spatial prior is defined based on the distance between voxels and foci in a coordinate-based meta-analysis database &#8212; neurolang 0.1a13.dev3+g0d36b00 documentation</title>
     <link rel="stylesheet" type="text/css" href="../_static/pygments.css?v=fa44fd50" />
     <link rel="stylesheet" type="text/css" href="../_static/bootstrap-sphinx.css?v=284a2d1d" />
     <link rel="stylesheet" type="text/css" href="../_static/sg_gallery.css?v=61a4c737" />
     <link rel="stylesheet" type="text/css" href="../_static/sg_gallery-binder.css?v=f4aeca0c" />
     <link rel="stylesheet" type="text/css" href="../_static/sg_gallery-dataframe.css?v=2082cf3c" />
     <link rel="stylesheet" type="text/css" href="../_static/sg_gallery-rendered-html.css?v=1277b6f3" />
-    <script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js?v=a18caea1"></script>
+    <script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js?v=25f98065"></script>
     <script src="../_static/doctools.js?v=888ff710"></script>
     <script src="../_static/sphinx_highlight.js?v=4825356b"></script>
     <link rel="index" title="Index" href="../genindex.html" />
@@ -41,7 +41,7 @@
         </button>
         <a class="navbar-brand" href="../index.html">
           neurolang</a>
-        <span class="navbar-text navbar-version pull-left"><b>0.1a13.dev2+g8acac30</b></span>
+        <span class="navbar-text navbar-version pull-left"><b>0.1a13.dev3+g0d36b00</b></span>
       </div>
 
         <div class="collapse navbar-collapse nav-collapse">
@@ -259,7 +259,7 @@
 <span class="n">nilearn</span><span class="o">.</span><span class="n">plotting</span><span class="o">.</span><span class="n">show</span><span class="p">()</span>
 </pre></div>
 </div>
-<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 18.018 seconds)</p>
+<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 19.587 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-plot-cbma-spatial-prior-py">
 <div class="sphx-glr-download sphx-glr-download-python docutils container">
 <p><a class="reference download internal" download="" href="../_downloads/a4ff908e94c4a2df665538f58967c726/plot_cbma_spatial_prior.py"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Python</span> <span class="pre">source</span> <span class="pre">code:</span> <span class="pre">plot_cbma_spatial_prior.py</span></code></a></p>
@@ -296,7 +296,7 @@
   </div>
 </footer>
 <div class="container neurolang-timestamp">
-    <p style="margin-top: -10px;">on 12 Sep 2023, 14:23:23</p>
+    <p style="margin-top: -10px;">on 14 Sep 2023, 16:34:40</p>
 </div>
   </body>
 </html>
diff --git a/dev/auto_examples/plot_load_destrieux_datalog_ir.html b/dev/auto_examples/plot_load_destrieux_datalog_ir.html
@@ -5,14 +5,14 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>Datalog Intermediate Representation Example based on the Destrieux Atlas &#8212; neurolang 0.1a13.dev2+g8acac30 documentation</title>
+    <title>Datalog Intermediate Representation Example based on the Destrieux Atlas &#8212; neurolang 0.1a13.dev3+g0d36b00 documentation</title>
     <link rel="stylesheet" type="text/css" href="../_static/pygments.css?v=fa44fd50" />
     <link rel="stylesheet" type="text/css" href="../_static/bootstrap-sphinx.css?v=284a2d1d" />
     <link rel="stylesheet" type="text/css" href="../_static/sg_gallery.css?v=61a4c737" />
     <link rel="stylesheet" type="text/css" href="../_static/sg_gallery-binder.css?v=f4aeca0c" />
     <link rel="stylesheet" type="text/css" href="../_static/sg_gallery-dataframe.css?v=2082cf3c" />
     <link rel="stylesheet" type="text/css" href="../_static/sg_gallery-rendered-html.css?v=1277b6f3" />
-    <script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js?v=a18caea1"></script>
+    <script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js?v=25f98065"></script>
     <script src="../_static/doctools.js?v=888ff710"></script>
     <script src="../_static/sphinx_highlight.js?v=4825356b"></script>
     <link rel="index" title="Index" href="../genindex.html" />
@@ -41,7 +41,7 @@
         </button>
         <a class="navbar-brand" href="../index.html">
           neurolang</a>
-        <span class="navbar-text navbar-version pull-left"><b>0.1a13.dev2+g8acac30</b></span>
+        <span class="navbar-text navbar-version pull-left"><b>0.1a13.dev3+g0d36b00</b></span>
       </div>
 
         <div class="collapse navbar-collapse nav-collapse">
@@ -196,7 +196,7 @@ <h2>Load the Destrieux example from nilearn as a fact list<a class="headerlink"
 <span class="n">plotting</span><span class="o">.</span><span class="n">plot_roi</span><span class="p">(</span><span class="n">region_dict</span><span class="p">[</span><span class="s1">&#39;L S_temporal_sup&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">spatial_image</span><span class="p">())</span>
 </pre></div>
 </div>
-<img src="../_images/sphx_glr_plot_load_destrieux_datalog_ir_001.png" srcset="../_images/sphx_glr_plot_load_destrieux_datalog_ir_001.png" alt="plot load destrieux datalog ir" class = "sphx-glr-single-img"/><div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span>&lt;nilearn.plotting.displays.OrthoSlicer object at 0x7fbe5f154760&gt;
+<img src="../_images/sphx_glr_plot_load_destrieux_datalog_ir_001.png" srcset="../_images/sphx_glr_plot_load_destrieux_datalog_ir_001.png" alt="plot load destrieux datalog ir" class = "sphx-glr-single-img"/><div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span>&lt;nilearn.plotting.displays.OrthoSlicer object at 0x7f276ff46c70&gt;
 </pre></div>
 </div>
 <p>Make the fact list</p>
@@ -338,7 +338,7 @@ <h2>Interpreting and running the query<a class="headerlink" href="#interpreting-
 <li><img src="../_images/sphx_glr_plot_load_destrieux_datalog_ir_060.png" srcset="../_images/sphx_glr_plot_load_destrieux_datalog_ir_060.png" alt="plot load destrieux datalog ir" class = "sphx-glr-multi-img"/></li>
 <li><img src="../_images/sphx_glr_plot_load_destrieux_datalog_ir_061.png" srcset="../_images/sphx_glr_plot_load_destrieux_datalog_ir_061.png" alt="plot load destrieux datalog ir" class = "sphx-glr-multi-img"/></li>
 </ul>
-<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (1 minutes 15.596 seconds)</p>
+<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (1 minutes 18.890 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-plot-load-destrieux-datalog-ir-py">
 <div class="sphx-glr-download sphx-glr-download-python docutils container">
 <p><a class="reference download internal" download="" href="../_downloads/a87ca17791f020cb5d8277d3955aecea/plot_load_destrieux_datalog_ir.py"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Python</span> <span class="pre">source</span> <span class="pre">code:</span> <span class="pre">plot_load_destrieux_datalog_ir.py</span></code></a></p>
@@ -376,7 +376,7 @@ <h2>Interpreting and running the query<a class="headerlink" href="#interpreting-
   </div>
 </footer>
 <div class="container neurolang-timestamp">
-    <p style="margin-top: -10px;">on 12 Sep 2023, 14:23:23</p>
+    <p style="margin-top: -10px;">on 14 Sep 2023, 16:34:40</p>
 </div>
   </body>
 </html>