v0.13.0

OceanBioME v0.13.0

Diff since v0.12.0

Breaking changes

• Drastically changes BiogeochemicalParticles

Merged pull requests:

• Make particles easier to use (#220) (@jagoosw)

Closed issues:

• PISCES (#44)
• PAR units (#83)
• Model implementation example is broken (#200)

v0.12.0

OceanBioME v0.12.0

Diff since v0.11.2

Merged pull requests:

• (0.12.0) Implements PISCES model (#178) (@jagoosw)

Closed issues:

• Update gas transfer coefficients (#168)
• Data assimilation example is broken!!! (#214)

v0.11.2

OceanBioME v0.11.2

Diff since v0.11.1

Merged pull requests:

• Fixes setup_sinking_velocities and adds tests (#210) (@jagoosw)
• Refactors to improve code clarity and make changing parameterisations easier (#212) (@jagoosw)
• Fixs data assimilation example (#215) (@jagoosw)
• Rewrites PISCES to be a discrete form model, I think over all this makes the implementation a lot more flexible (#217) (@jagoosw)

v0.11.1

OceanBioME v0.11.1

Diff since v0.11.0

Fixes bug in gas exchange for O2

Merged pull requests:

• Adds Morel like MultiBandPhotosyntheticallyActiveRadiation (#195) (@jagoosw)
• Hmw ct jsw/pisces (#204) (@ciadht)
• Fixs some typos in carbon chemistry maths (#206) (@jagoosw)
• Hmw ct jsw/pisces (#207) (@ciadht)
• Pull Light from Jago's branch (#208) (@ciadht)
• Hmw ct jsw/pisces (#209) (@ciadht)
• Fixes gas exchange for partially soluble gasses like oxygen (#211) (@jagoosw)

v0.11.0

OceanBioME v0.11.0

Diff since v0.10.5

This PR overhauls the carbon chemistry model and changes the API to access the model.

Merged pull requests:

• Refactors gas exchange carbon chemistry (+ adds some complexity) (#186) (@jagoosw)
• Hmw ct jsw/pisces (#191) (@ciadht)
• New Box Model merge (#192) (@ciadht)
• Hmw ct jsw/pisces (#194) (@ciadht)
• Hmw ct jsw/pisces (#198) (@ciadht)
• Hmw ct jsw/pisces (#199) (@ciadht)
• Hmw ct jsw/pisces (#201) (@ciadht)
• Changed function names (#202) (@ciadht)
• Hmw ct jsw/pisces (#203) (@ciadht)

Closed issues:

• Non-zero CO2 surface flux for an ocean in equilibrium (with non-zero average wind speed) (#197)

v0.10.5

OceanBioME v0.10.5

Diff since v0.10.4

Merged pull requests:

• Fixs box model SpeedyOutput + adds tests for BoxModel (#188) (@jagoosw)

v0.10.4

OceanBioME v0.10.4

Diff since v0.10.3

Merged pull requests:

• update index.md (#177) (@jagoosw)
• hmw ct jsw/pisces (#181) (@ciadht)
• Nitrates and ammonium (#182) (@hannahmw1)
• Adds nanophytoplankton model (#183) (@ciadht)
• Make BoxModels speedy again (+ introduce prescribed PAR) (#185) (@jagoosw)
• Hmw ct jsw/pisces (#187) (@ciadht)

v0.10.3

OceanBioME v0.10.3

Diff since v0.10.2

Merged pull requests:

• Attempt to bump compats (#176) (@jagoosw)

v0.10.2

OceanBioME v0.10.2

Diff since v0.10.1

Merged pull requests:

• Added invalid_fill_value to ScaleNegativeTracers (#170) (@jagoosw)

v0.10.1

OceanBioME v0.10.1

Diff since v0.10.0

Merged pull requests:

• Use Julia v1.10 + CairoMakie v0.11 (#166) (@navidcy)
• Add missing dois in bib file (#167) (@navidcy)
• Update convenience constructor (NutrientPhytoplanktonZooplanktonDetritus and LOBSTER) docstrings (#169) (@jagoosw)

Closed issues:

• Docstrings are outdated for NPZD model (#151)