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Handle new reference naming #173

Merged
merged 8 commits into from
Oct 2, 2023
Merged

Handle new reference naming #173

merged 8 commits into from
Oct 2, 2023

Commits on Sep 18, 2023

  1. More default memory for plink, needed for a bigger reference (gnomAD).

    @smlmbrt
    smlmbrt committed Sep 18, 2023
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  2. More generalized file pattern for relatedness files in a reference ("… 

    …GRCh3#_*.king.cutoff.out.id") with a single meta ID.

ToDo: rename the deg2 relatedness files in setup_resource.nf / bootstrap_ancestry.nf
    @smlmbrt
    smlmbrt committed Sep 18, 2023
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Commits on Oct 2, 2023

  1. Update report.qmd to handle other colours

    @smlmbrt
    smlmbrt authored Oct 2, 2023
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  2. give king cutoff files consistent names

    @nebfield
    nebfield committed Oct 2, 2023
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  3. fix test

    @nebfield
    nebfield committed Oct 2, 2023
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  4. Merge branch 'dev' into opt_ref

    @nebfield
    nebfield authored Oct 2, 2023
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  5. add version check to extract_database

    @nebfield
    nebfield committed Oct 2, 2023
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  6. add version check to extract_database

    @nebfield
    nebfield committed Oct 2, 2023
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