Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Use groovy to parse samplesheets #243

Merged
merged 9 commits into from
Feb 15, 2024
Merged

Use groovy to parse samplesheets #243

merged 9 commits into from
Feb 15, 2024

Commits on Feb 14, 2024

  1. implement groovy functions for samplesheet parsing

    @nebfield
    nebfield committed Feb 14, 2024
    Configuration menu
    Copy the full SHA
    64444e1 View commit details
    Browse the repository at this point in the history

Commits on Feb 15, 2024

  1. set up utility class

    @nebfield
    nebfield committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    131bfc5 View commit details
    Browse the repository at this point in the history

  2. add build to map

    @nebfield
    nebfield committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    a84ee25 View commit details
    Browse the repository at this point in the history

  3. add json support

    @nebfield
    nebfield committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    77cfef1 View commit details
    Browse the repository at this point in the history

  4. rename json parser

    @nebfield
    nebfield committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    f9086da View commit details
    Browse the repository at this point in the history

  5. delete samplesheet module

    @nebfield
    nebfield committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    8022044 View commit details
    Browse the repository at this point in the history

  6. remove mount docs (deprecated)

    @nebfield
    nebfield committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    10c69f9 View commit details
    Browse the repository at this point in the history

  7. remove out.json from expected test output

    @nebfield
    nebfield committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    6adec1e View commit details
    Browse the repository at this point in the history

  8. fix parsing vcf samplesheet

    @nebfield
    nebfield committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    2bd7921 View commit details
    Browse the repository at this point in the history