Merge pull request #3394 from harshagr70/GH-3392-vignettebuilder-deps

Updated VignetteBuilder field to include knitr and rmarkdown
PecanProject · Nov 4, 2024 · caad7b3 · caad7b3
2 parents 4faeac6 + a9b76ff
commit caad7b3
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Showing 14 changed files with 15 additions and 13 deletions.
diff --git a/base/db/DESCRIPTION b/base/db/DESCRIPTION
@@ -73,7 +73,7 @@ Suggests:
     tidyverse,
     withr
 License: BSD_3_clause + file LICENSE
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
 Copyright: Authors
 LazyLoad: yes
 LazyData: FALSE

diff --git a/base/qaqc/DESCRIPTION b/base/qaqc/DESCRIPTION
@@ -35,6 +35,6 @@ Copyright: Authors
 LazyLoad: yes
 LazyData: FALSE
 Encoding: UTF-8
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
 Config/testthat/edition: 3
 RoxygenNote: 7.3.2
diff --git a/base/visualization/DESCRIPTION b/base/visualization/DESCRIPTION
@@ -51,6 +51,6 @@ Copyright: Authors
 LazyLoad: yes
 LazyData: FALSE
 Encoding: UTF-8
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
 RoxygenNote: 7.3.2
 Roxygen: list(markdown = TRUE)
diff --git a/docker/depends/pecan_package_dependencies.csv b/docker/depends/pecan_package_dependencies.csv
@@ -495,6 +495,7 @@
 "rmarkdown","*","models/biocro","Suggests",FALSE
 "rmarkdown","*","models/ed","Suggests",FALSE
 "rmarkdown","*","models/maat","Suggests",FALSE
+"rmarkdown","*","modules/data.atmosphere","Suggests",FALSE
 "rmarkdown","*","modules/priors","Suggests",FALSE
 "rmarkdown","*","modules/rtm","Suggests",FALSE
 "rmarkdown",">= 2.19","base/db","Suggests",FALSE

diff --git a/models/biocro/DESCRIPTION b/models/biocro/DESCRIPTION
@@ -38,5 +38,5 @@ Remotes:
 License: BSD_3_clause + file LICENSE
 Copyright: Energy Biosciences Institute, Authors
 Encoding: UTF-8
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
 RoxygenNote: 7.3.2
diff --git a/models/ed/DESCRIPTION b/models/ed/DESCRIPTION
@@ -63,7 +63,7 @@ Suggests:
 Additional_repositories: https://pecanproject.r-universe.dev/
 License: BSD_3_clause + file LICENSE
 Copyright: Authors
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
 LazyData: true
 Encoding: UTF-8
 RoxygenNote: 7.3.2

diff --git a/models/maat/DESCRIPTION b/models/maat/DESCRIPTION
@@ -23,7 +23,7 @@ SystemRequirements: MAAT
 OS_type: unix
 License: BSD_3_clause + file LICENSE
 Copyright: Authors
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
 LazyLoad: yes
 LazyData: FALSE
 Encoding: UTF-8

diff --git a/modules/allometry/DESCRIPTION b/modules/allometry/DESCRIPTION
@@ -30,4 +30,4 @@ LazyLoad: yes
 LazyData: FALSE
 Encoding: UTF-8
 RoxygenNote: 7.3.2
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
diff --git a/modules/assim.batch/DESCRIPTION b/modules/assim.batch/DESCRIPTION
@@ -14,7 +14,7 @@ Description: The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific
     model parameterization, execution, and analysis. The goal of PECAn is to
     streamline the interaction between data and models, and to improve the
     efficacy of scientific investigation.
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
 Imports:
     abind,
     BayesianTools,

diff --git a/modules/data.atmosphere/DESCRIPTION b/modules/data.atmosphere/DESCRIPTION
@@ -69,6 +69,7 @@ Suggests:
     PEcAn.settings,
     progress,
     reticulate,
+    rmarkdown,
     testthat (>= 3.1.7),
     withr
 Remotes:
@@ -80,6 +81,6 @@ License: BSD_3_clause + file LICENSE
 Copyright: Authors
 LazyLoad: yes
 LazyData: FALSE
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
 Encoding: UTF-8
 RoxygenNote: 7.3.2
diff --git a/modules/meta.analysis/DESCRIPTION b/modules/meta.analysis/DESCRIPTION
@@ -42,7 +42,7 @@ Suggests:
     testthat (>= 1.0.2)
 SystemRequirements: JAGS
 License: BSD_3_clause + file LICENSE
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
 Copyright: Authors
 LazyData: FALSE
 Encoding: UTF-8

diff --git a/modules/photosynthesis/DESCRIPTION b/modules/photosynthesis/DESCRIPTION
@@ -36,4 +36,4 @@ LazyLoad: yes
 LazyData: FALSE
 Encoding: UTF-8
 RoxygenNote: 7.3.2
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
diff --git a/modules/priors/DESCRIPTION b/modules/priors/DESCRIPTION
@@ -24,5 +24,5 @@ Suggests:
     rmarkdown,
     testthat
 Encoding: UTF-8
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
 RoxygenNote: 7.3.2
diff --git a/modules/rtm/DESCRIPTION b/modules/rtm/DESCRIPTION
@@ -37,6 +37,6 @@ Copyright: Authors
 LazyLoad: yes
 LazyData: FALSE
 Encoding: UTF-8
-VignetteBuilder: knitr
+VignetteBuilder: knitr, rmarkdown
 Roxygen: list(markdown = TRUE)
 RoxygenNote: 7.3.2