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Merge pull request #3207 from meetagrawal09/test-ERA5
Added Integration Tests for `download.ERA5`
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modules/data.atmosphere/inst/integrationTests/test.download.ERA5.R
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library(testthat) | ||
library(ncdf4) | ||
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test_download_ERA5 <- function(start_date, end_date, lat.in, lon.in, product_types, reticulate_python) { | ||
# putting logger to debug mode | ||
PEcAn.logger::logger.setUseConsole(TRUE, FALSE) | ||
on.exit(PEcAn.logger::logger.setUseConsole(TRUE, TRUE), add = TRUE) | ||
PEcAn.logger::logger.setLevel("DEBUG") | ||
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# mocking functions | ||
mockery::stub(PEcAn.DB::convert_input, 'dbfile.input.check', data.frame()) | ||
mockery::stub(PEcAn.DB::convert_input, 'db.query', data.frame(id = 1)) | ||
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# additional mocks needed since download.ERA5 does not return data as other download functions | ||
mockery::stub(PEcAn.DB::convert_input, 'length', 2) | ||
mockery::stub(PEcAn.DB::convert_input, 'purrr::map_dfr', data.frame(missing = c(FALSE), empty = c(FALSE))) | ||
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withr::with_dir(tempdir(), { | ||
tmpdir <- getwd() | ||
PEcAn.DB::convert_input( | ||
input.id = NA, | ||
outfolder = tmpdir, | ||
formatname = NULL, | ||
mimetype = NULL, | ||
site.id = 1, | ||
start_date = start_date, | ||
end_date = end_date, | ||
pkg = 'PEcAn.data.atmosphere', | ||
fcn = 'download.ERA5.old', | ||
con = NULL, | ||
host = data.frame(name = "localhost"), | ||
browndog = NULL, | ||
write = FALSE, | ||
lat.in = lat.in, | ||
lon.in = lon.in, | ||
product_types = product_types, | ||
reticulate_python = reticulate_python | ||
) | ||
}) | ||
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test_that("All the required files are downloaded and stored at desired location", { | ||
expect_true(file.exists(paste0(tmpdir, "/era5.2m_dewpoint_temperature.nc"))) | ||
expect_true(file.exists(paste0(tmpdir, "/era5.2m_temperature.nc"))) | ||
expect_true(file.exists(paste0(tmpdir, "/era5.10m_u_component_of_wind.nc"))) | ||
expect_true(file.exists(paste0(tmpdir, "/era5.10m_v_component_of_wind.nc"))) | ||
expect_true(file.exists(paste0(tmpdir, "/era5.surface_pressure.nc"))) | ||
expect_true(file.exists(paste0(tmpdir, "/era5.surface_solar_radiation_downwards.nc"))) | ||
expect_true(file.exists(paste0(tmpdir, "/era5.surface_thermal_radiation_downwards.nc"))) | ||
expect_true(file.exists(paste0(tmpdir, "/era5.total_precipitation.nc"))) | ||
}) | ||
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test_that("All ERA5 data files have the correct variable units", { | ||
nc <- nc_open(paste0(tmpdir, "/era5.2m_dewpoint_temperature.nc")) | ||
expect_equal(nc$var$d2m$units, "K") | ||
nc_close(nc) | ||
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nc <- nc_open(paste0(tmpdir, "/era5.2m_temperature.nc")) | ||
expect_equal(nc$var$t2m$units, "K") | ||
nc_close(nc) | ||
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nc <- nc_open(paste0(tmpdir, "/era5.10m_u_component_of_wind.nc")) | ||
expect_equal(nc$var$u10$units, "m s**-1") | ||
nc_close(nc) | ||
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nc <- nc_open(paste0(tmpdir, "/era5.10m_v_component_of_wind.nc")) | ||
expect_equal(nc$var$v10$units, "m s**-1") | ||
nc_close(nc) | ||
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nc <- nc_open(paste0(tmpdir, "/era5.surface_pressure.nc")) | ||
expect_equal(nc$var$sp$units, "Pa") | ||
nc_close(nc) | ||
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nc <- nc_open(paste0(tmpdir, "/era5.surface_solar_radiation_downwards.nc")) | ||
expect_equal(nc$var$ssrd$units, "J m**-2") | ||
nc_close(nc) | ||
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nc <- nc_open(paste0(tmpdir, "/era5.surface_thermal_radiation_downwards.nc")) | ||
expect_equal(nc$var$strd$units, "J m**-2") | ||
nc_close(nc) | ||
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nc <- nc_open(paste0(tmpdir, "/era5.total_precipitation.nc")) | ||
expect_equal(nc$var$tp$units, "m") | ||
nc_close(nc) | ||
}) | ||
} | ||
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test_download_ERA5( | ||
start_date = "2010-01-01", | ||
end_date = "2010-02-01", | ||
lat.in = 45.5594, | ||
lon.in = -84.6738, | ||
product_types = "all", | ||
reticulate_python = NULL | ||
) |