Skip to content

added new workflows #73

added new workflows

added new workflows #73

Workflow file for this run

# This is file is automatically generated. Do not edit.
name: 'dcm2niix'
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
on:
push:
branches: ["test_docker_build"]
jobs:
dcm2niix:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
base_image: ['ubuntu:22.04', 'ubuntu:18.04', 'debian:bullseye-slim', 'debian:buster-slim', 'fedora:36', 'centos:7']
version: ['latest', 'v1.0.20201102', 'v1.0.20200331', 'v1.0.20190902']
method: ['binaries', 'source']
steps:
- uses: actions/checkout@v3
- name: Set up Python
uses: actions/setup-python@v4
with:
python-version: "3.11"
- name: Install neurodocker
run: python -m pip install --editable .[dev]
- name: Generate Dockerfile
run: |
apt_based=('ubuntu:22.04', 'ubuntu:18.04', 'debian:bullseye-slim', 'debian:buster-slim')
if [[ " ${apt_based[*]} " =~ ${{ matrix.base_image }} ]]; then
pkg_manager="apt"
fi
yum_based=('fedora:36', 'centos:7')
if [[ " ${yum_based[*]} " =~ ${{ matrix.base_image }} ]]; then
pkg_manager="yum"
fi
neurodocker \
generate docker \
--base-image=${{ matrix.base_image }} \
--pkg-manager=${pkg_manager} \
--yes \
--dcm2niix \
version=${{ matrix.version }} \
method=${{ matrix.method }} \
> Dockerfile_tmp
cat Dockerfile_tmp
- name: Build the Docker image
run: docker build -f Dockerfile_tmp .