Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Is it applicable to genome and sequencing data from other species? #1

Open
wangnan9394 opened this issue Nov 4, 2022 · 2 comments
Open

Is it applicable to genome and sequencing data from other species? #1

wangnan9394 opened this issue Nov 4, 2022 · 2 comments

Comments

@wangnan9394
Copy link

Hi,
This is an amazing tool! Based on the paper, it is strong in SV detection.
Will it have a wider range of applications? animals, plants? ; )
@mariesaitou
Copy link

Hi, I have a related question. It does not specify the reference genome in the manual at least. Is it possible to use the user's preferred reference genome, and if so, how?

@kuro7766
Copy link

Hi, I have a related question. It does not specify the reference genome in the manual at least. Is it possible to use the user's preferred reference genome, and if so, how?

Two years have passed, I'm not sure you still have this problem, it should be in https://github.com/SFGLab/ConsensuSV-pipeline/blob/main/config.py

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
3 participants
@mariesaitou @kuro7766 @wangnan9394