pyproject.toml

[build-system]
requires = [
    "setuptools>=64.0"
]
build-backend = "setuptools.build_meta"

[project]
name = "gstripe"
version = "1.0"
authors = [
    { name = "Michał Denkiewicz", email = "michal.denkiewicz@datascience.edu.pl" },
]
description = "Graph-based stripe caller using chromain interaction data."
readme = "README.md"
requires-python = ">=3.10"
license = {file = "LICENSE.txt"}
keywords = ["stripes"]
classifiers = [
    "Private :: Do Not Upload",
    "Programming Language :: Python :: 3",
    "License :: OSI Approved :: MIT License"
]

dependencies = [
    "numpy >= 2.0.0",
    "pandas >= 2.2.2",
    "scipy >= 1.13.1",
    "igraph >= 0.11.5",
    "matplotlib >= 3.9.0",
    "setuptools>=70.1.0",
    "seaborn >= 0.13.2"
]

[project.optional-dependencies]
test = [
    "pytest"
]
stats = [    
    "hic-straw >= 1.3.1"
]

[tool.pytest.ini_options]
addopts = [
    "--import-mode=importlib",
]
pythonpath = [
  "src"
]