Test schematic API #23
Workflow file for this run
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# Built from: | |
# https://github.com/Sage-Bionetworks/schematic/blob/develop/.github/workflows/test.yml | |
name: Test schematic API | |
on: | |
workflow_dispatch: | |
inputs: | |
perform_benchmarking: | |
required: true | |
type: boolean | |
description: perform benchmarking test (True) or skip (False) | |
jobs: | |
test: | |
runs-on: ubuntu-latest | |
env: | |
POETRY_VERSION: 1.3.0 | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ["3.9", "3.10"] | |
steps: | |
#---------------------------------------------- | |
# check-out repo and set-up python | |
#---------------------------------------------- | |
- name: Check out repository | |
uses: actions/checkout@v2 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v2 | |
with: | |
python-version: ${{ matrix.python-version }} | |
#---------------------------------------------- | |
# install & configure poetry | |
#---------------------------------------------- | |
- name: Install Poetry | |
run: | | |
curl -sSL https://install.python-poetry.org \ | |
| python3 - --version ${{ env.POETRY_VERSION }}; | |
poetry config virtualenvs.create true; | |
poetry config virtualenvs.in-project true; | |
#---------------------------------------------- | |
# load cached venv if cache exists | |
#---------------------------------------------- | |
- name: Load cached venv | |
id: cached-poetry-dependencies | |
uses: actions/cache@v2 | |
with: | |
path: .venv | |
key: venv-${{ runner.os }}-${{ hashFiles('**/poetry.lock') }} | |
#---------------------------------------------- | |
# install dependencies and root project | |
#---------------------------------------------- | |
- name: Install dependencies and root project | |
if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true' | |
run: poetry install --no-interaction --all-extras | |
#---------------------------------------------- | |
# run API test suite | |
#---------------------------------------------- | |
- name: Run all API tests | |
env: | |
SYNAPSE_ACCESS_TOKEN: ${{ secrets.SYNAPSE_ACCESS_TOKEN }} | |
SERVICE_ACCOUNT_CREDS: ${{ secrets.SERVICE_ACCOUNT_CREDS }} | |
if: ${{ inputs.perform_benchmarking }} | |
run: > | |
source .venv/bin/activate; | |
pytest -m "schematic_api and not submission" | |
- name: Run API tests + Exclude Benchmarks | |
env: | |
SYNAPSE_ACCESS_TOKEN: ${{ secrets.SYNAPSE_ACCESS_TOKEN }} | |
SERVICE_ACCOUNT_CREDS: ${{ secrets.SERVICE_ACCOUNT_CREDS }} | |
if: ${{ false == inputs.perform_benchmarking }} | |
run: > | |
source .venv/bin/activate; | |
pytest -m "schematic_api and not submission and not rule_benchmark" |