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Releases: SciML/StructuralIdentifiability.jl

v0.5.11

21 Dec 22:23
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StructuralIdentifiability v0.5.11

Diff since v0.5.10

Merged pull requests:

Closed issues:

  • StructuralIdentifiability fails to precompile under Julia v1.11 (#364)

v0.5.10

12 Dec 07:17
7faf054
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StructuralIdentifiability v0.5.10

Diff since v0.5.9

Merged pull requests:

  • Bump crate-ci/typos from 1.23.6 to 1.24.1 (#350) (@dependabot[bot])
  • Bump crate-ci/typos from 1.24.1 to 1.24.3 (#351) (@dependabot[bot])
  • Bump crate-ci/typos from 1.24.3 to 1.24.5 (#352) (@dependabot[bot])
  • Bump crate-ci/typos from 1.24.5 to 1.24.6 (#353) (@dependabot[bot])
  • CompatHelper: bump compat for AbstractAlgebra to 0.43, (keep existing compat) (#354) (@github-actions[bot])
  • CompatHelper: bump compat for Nemo to 0.47, (keep existing compat) (#355) (@github-actions[bot])
  • CompatHelper: bump compat for Groebner to 0.8, (keep existing compat) (#356) (@github-actions[bot])
  • Bump crate-ci/typos from 1.24.6 to 1.26.8 (#365) (@dependabot[bot])
  • Bump codecov/codecov-action from 4 to 5 (#368) (@dependabot[bot])
  • Bump crate-ci/typos from 1.26.8 to 1.28.2 (#369) (@dependabot[bot])
  • removing precompilation (#370) (@pogudingleb)

Closed issues:

  • v0.5.9 compatibility with Catalyst (#349)
  • Right hand side derivative (#359)

v0.5.9

19 Aug 22:49
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StructuralIdentifiability v0.5.9

Diff since v0.5.8

Merged pull requests:

  • Adding known_ic (known generic initial conditions) to the MTK interface (#331) (@pogudingleb)
  • Adding MTK interface for the discrete-time identifiability (#332) (@pogudingleb)
  • Bump crate-ci/typos from 1.22.0 to 1.22.3 (#333) (@dependabot[bot])
  • Bump crate-ci/typos from 1.22.3 to 1.22.7 (#334) (@dependabot[bot])
  • Bump crate-ci/typos from 1.22.7 to 1.22.9 (#335) (@dependabot[bot])
  • Bump crate-ci/typos from 1.22.9 to 1.23.1 (#336) (@dependabot[bot])
  • Bump crate-ci/typos from 1.23.1 to 1.23.2 (#337) (@dependabot[bot])
  • CompatHelper: bump compat for AbstractAlgebra to 0.42, (keep existing compat) (#338) (@github-actions[bot])
  • CompatHelper: bump compat for Nemo to 0.46, (keep existing compat) (#339) (@github-actions[bot])
  • Bump crate-ci/typos from 1.23.2 to 1.23.3 (#340) (@dependabot[bot])
  • Bump crate-ci/typos from 1.23.3 to 1.23.5 (#342) (@dependabot[bot])
  • Bump crate-ci/typos from 1.23.5 to 1.23.6 (#343) (@dependabot[bot])
  • Updating MTK interface (#346) (@pogudingleb)
  • Fixing downgrade tests (#347) (@pogudingleb)

Closed issues:

  • Cannot (?) use known_ic in combination with MTK variables (#324)
  • SI not compatible with latest Symbolics, SymbolicUtils, and ModelingToolkit versions (#326)

v0.5.8

07 Jun 19:38
e0ef076
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StructuralIdentifiability v0.5.8

Diff since v0.5.7

Merged pull requests:

  • Bump crate-ci/typos from 1.20.8 to 1.20.9 (#313) (@dependabot[bot])
  • CompatHelper: bump compat for AbstractAlgebra to 0.41, (keep existing compat) (#314) (@github-actions[bot])
  • Bump crate-ci/typos from 1.20.9 to 1.20.10 (#315) (@dependabot[bot])
  • CompatHelper: bump compat for Nemo to 0.44, (keep existing compat) (#316) (@github-actions[bot])
  • CompatHelper: bump compat for Nemo to 0.45, (keep existing compat) (#319) (@github-actions[bot])
  • Bump crate-ci/typos from 1.20.10 to 1.21.0 (#320) (@dependabot[bot])
  • Restrict Julia version to <= 1.10.2 (#322) (@sumiya11)
  • CompatHelper: bump compat for SymbolicUtils in [weakdeps] to 2, (keep existing compat) (#323) (@github-actions[bot])
  • Bump crate-ci/typos from 1.21.0 to 1.22.0 (#325) (@dependabot[bot])
  • Bump the symbolic libraries and fix deprecations (#327) (@ChrisRackauckas)
  • Sequel to #327 (#328) (@pogudingleb)
  • Lower bound for the Julia version (compat ne vinovat) (#329) (@pogudingleb)
  • bounding julia version from above (#330) (@pogudingleb)

Closed issues:

  • Cannot precompile on v1.10.3 (#321)

v0.5.7

18 Apr 22:55
76ddd5c
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StructuralIdentifiability v0.5.7

Diff since v0.5.6

Merged pull requests:

v0.5.6

10 Apr 04:38
91869e9
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StructuralIdentifiability v0.5.6

Diff since v0.5.5

Merged pull requests:

v0.5.5

10 Mar 20:38
4bdb04a
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StructuralIdentifiability v0.5.5

Diff since v0.5.4

Merged pull requests:

  • Bump actions/checkout from 3 to 4 (#282) (@dependabot[bot])
  • Bump codecov/codecov-action from 3 to 4 (#283) (@dependabot[bot])
  • Bump crate-ci/typos from 1.16.23 to 1.18.1 (#284) (@dependabot[bot])
  • ci: explicitly specify token for codecov (#285) (@thazhemadam)
  • Update Groebner.jl and PirlimPinPin.jl (#287) (@sumiya11)
  • Bump crate-ci/typos from 1.18.1 to 1.18.2 (#288) (@dependabot[bot])
  • updating compats for AA & Nemo (#290) (@pogudingleb)
  • CompatHelper: bump compat for Nemo to 0.42, (keep existing compat) (#291) (@github-actions[bot])
  • CompatHelper: bump compat for AbstractAlgebra to 0.39, (keep existing compat) (#292) (@github-actions[bot])
  • [skip ci] update downgrade CI repo (#293) (@ArnoStrouwen)
  • CompatHelper: bump compat for AbstractAlgebra to 0.40, (keep existing compat) (#294) (@github-actions[bot])
  • CompatHelper: bump compat for Nemo to 0.43, (keep existing compat) (#295) (@github-actions[bot])
  • Update ModelingToolkit.jl (#296) (@sumiya11)
  • CompatHelper: bump compat for ParamPunPam to 0.4, (keep existing compat) (#297) (@github-actions[bot])
  • updating to the newest AA and Nemo (#299) (@pogudingleb)
  • Getting Nemo&AA update (#300) (@pogudingleb)
  • Update to MTK9 (#301) (@pogudingleb)
  • Bump crate-ci/typos from 1.18.2 to 1.19.0 (#302) (@dependabot[bot])
  • Fix issues with unicode names (#303) (@sumiya11)

Closed issues:

  • Write how to define models with MTK (#155)
  • Algebraic function in the ODE for structural analysis? (#174)
  • Structural Analysis for algebraic difference equations (DiscreteSystem) (#175)
  • Including initial conditions in equations (#236)
  • Option for having a known initial condition (#237)
  • Using ModelingToolkit to mark ODE inputs and outputs for StructuralIdentifiability (#268)

v0.5.4

05 Feb 20:19
87e43c2
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StructuralIdentifiability v0.5.4

Diff since v0.5.3

Merged pull requests:

  • WIP: Identifiability with known generic initial conditions (#249) (@pogudingleb)

Closed issues:

  • mtk_to_si no longer defined/exported with new functionality. (#279)

v0.5.3

01 Feb 22:51
63158d5
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StructuralIdentifiability v0.5.3

Diff since v0.5.2

Merged pull requests:

Closed issues:

  • Fixing type piracy (#254)
  • Alternative names for certain kwargs? (#256)

v0.5.2

27 Jan 13:01
7fd2f68
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StructuralIdentifiability v0.5.2

Diff since v0.5.1

Merged pull requests:

  • Add Downgrade.yml (#255) (@sumiya11)
  • CompatHelper: bump compat for AbstractAlgebra to 0.35, (keep existing compat) (#257) (@github-actions[bot])
  • CompatHelper: bump compat for Nemo to 0.39, (keep existing compat) (#258) (@github-actions[bot])
  • CompatHelper: bump compat for Groebner to 0.6, (keep existing compat) (#259) (@github-actions[bot])
  • update from master (#260) (@pogudingleb)
  • Bump actions/checkout from 3 to 4 (#261) (@dependabot[bot])
  • renaming p to prob_threschold (#262) (@pogudingleb)
  • CompatHelper: bump compat for ParamPunPam to 0.3, (keep existing compat) (#265) (@github-actions[bot])
  • Render ModelingToolkit as an extension (#266) (@pogudingleb)
  • Bump actions/cache from 3 to 4 (#267) (@dependabot[bot])
  • removing Requires from the deps (#273) (@pogudingleb)

Closed issues:

  • Structural Identifiability for Interpolation (#219)
  • Displaying (t) in the output for the case when the input is in the internal SI format. (#243)