Update to Spezi 1.0 (#42)

.firebaserc

@@ -2,4 +2,4 @@
   "projects": {
     "default": "cs342-2023-paws"
   }
-}	
+}

.firebaserc.license

@@ -1,6 +1,5 @@
+This source file is part of the PAWS application based on the Stanford Spezi Template Application project
 
-This source file is part of the CS342 2023 PAWS Team Application project
-
-SPDX-FileCopyrightText: 2023 Stanford University
+SPDX-FileCopyrightText: 2022 Stanford University and the project authors (see CONTRIBUTORS.md)
 
 SPDX-License-Identifier: MIT

.github/workflows/beta-deployment.yml

@@ -1,5 +1,5 @@
 #
-# This source file is part of the CS342 2023 PAWS Team Application project
+# This source file is part of the PAWS application based on the Stanford Spezi Template Application project
 #
 # SPDX-FileCopyrightText: 2023 Stanford University
 #
@@ -18,12 +18,27 @@ jobs:
   buildandtest:
     name: Build and Test
     uses: ./.github/workflows/build-and-test.yml
+    permissions:
+      contents: read
+    secrets: inherit
   iosapptestflightdeployment:
     name: iOS App TestFlight Deployment
     needs: buildandtest
     uses: CS342/.github/.github/workflows/xcodebuild-or-fastlane.yml@v2
-    secrets: inherit
+    permissions:
+      contents: read
     with:
-      artifactname: PAWS.xcresult
-      fastlanelane: beta
+      googleserviceinfoplistpath: 'PAWS/Supporting Files/GoogleService-Info.plist'
       setupsigning: true
+      fastlanelane: beta
+    secrets: inherit
+  deployfirebase:
+    name: Deploy Firebase Project
+    needs: iosapptestflightdeployment
+    uses: StanfordBDHG/.github/.github/workflows/firebase-deploy.yml@v2
+    permissions:
+      contents: read
+    with:
+      arguments: '--debug'
+    secrets:
+      GOOGLE_APPLICATION_CREDENTIALS_BASE64: ${{ secrets.GOOGLE_APPLICATION_CREDENTIALS_BASE64 }}

.github/workflows/build-and-test.yml

@@ -1,5 +1,5 @@
 #
-# This source file is part of the CS342 2023 PAWS Team Application project
+# This source file is part of the PAWS application based on the Stanford Spezi Template Application project
 #
 # SPDX-FileCopyrightText: 2023 Stanford University
 #
@@ -17,20 +17,35 @@ jobs:
   reuse_action:
     name: REUSE Compliance Check
     uses: StanfordBDHG/.github/.github/workflows/reuse.yml@v2
+    permissions:
+      contents: read
   swiftlint:
     name: SwiftLint
     uses: StanfordBDHG/.github/.github/workflows/swiftlint.yml@v2
+    permissions:
+      contents: read
+  markdownlinkcheck:
+    name: Markdown Link Check
+    uses: StanfordBDHG/.github/.github/workflows/markdown-link-check.yml@v2
+    permissions:
+      contents: read
   buildandtest:
     name: Build and Test
     uses: CS342/.github/.github/workflows/xcodebuild-or-fastlane.yml@v2
+    permissions:
+      contents: read
     with:
-      codeql: true
       artifactname: PAWS.xcresult
+      runsonlabels: '["macOS", "self-hosted"]'
       setupfirebaseemulator: true
       customcommand: "firebase emulators:exec 'fastlane test'"
   uploadcoveragereport:
     name: Upload Coverage Report
     needs: buildandtest
     uses: StanfordBDHG/.github/.github/workflows/create-and-upload-coverage-report.yml@v2
+    permissions:
+      contents: read
     with:
       coveragereports: PAWS.xcresult
+    secrets:
+      token: ${{ secrets.CODECOV_TOKEN }}

.github/workflows/monthly-markdown-link-check.yml.yml

@@ -0,0 +1,21 @@
+#
+# This source file is part of the PAWS application based on the Stanford Spezi Template Application project
+#
+# SPDX-FileCopyrightText: 2023 Stanford University and the project authors (see CONTRIBUTORS.md)
+#
+# SPDX-License-Identifier: MIT
+#
+
+name: Monthly Markdown Link Check
+
+on:
+  # Runs at midnight on the first of every month
+  schedule:
+    - cron: "0 0 1 * *"
+
+jobs:
+  markdown_link_check:
+    name: Markdown Link Check
+    uses: StanfordBDHG/.github/.github/workflows/markdown-link-check.yml@v2
+    permissions:
+      contents: read

.gitignore

@@ -1,5 +1,5 @@
 #
-# This source file is part of the CS342 2023 PAWS Team Application project
+# This source file is part of the PAWS application based on the Stanford Spezi Template Application project
 #
 # SPDX-FileCopyrightText: 2023 Stanford University
 #
@@ -9,11 +9,11 @@
 # Swift Package Manager
 *.xcodeproj
 .swiftpm
-.build/
+.derivedData
+.build
+.docs
 !PAWS.xcodeproj
 
-project.xcworkspace/
-
 # IDE related folders
 .idea
 
@@ -32,7 +32,6 @@ report.junit
 report.html
 PAWS.xcresult
 
-
 # Logs
 logs
 *.log
@@ -43,4 +42,7 @@ firebase-debug.log*
 firebase-debug.*.log*
 
 # Firebase cache
-.firebase/
+.firebase/
+
+# Swift Package List
+PAWS/package-list.json

.swiftlint.yml

@@ -1,11 +1,11 @@
 #
-# This source file is part of the CS342 2023 PAWS Team Application project
+# This source file is part of the PAWS application based on the Stanford Spezi Template Application project
 #
 # SPDX-FileCopyrightText: 2023 Stanford University
 #
 # SPDX-License-Identifier: MIT
 #
-  
+
 # The whitelist_rules configuration also includes rules that are enabled by default to provide a good overview of all rules.
 only_rules:
   # All Images that provide context should have an accessibility label. Purely decorative images can be hidden from accessibility.
@@ -379,6 +379,7 @@ deployment_target: # Availability checks or attributes shouldn’t be using olde
 excluded: # paths to ignore during linting. Takes precedence over `included`.
   - .build
   - .swiftpm
+  - .codeql
   - .derivedData
 
 closure_body_length: # Closure bodies should not span too many lines.

CITATION.cff

@@ -1,5 +1,5 @@
 #
-# This source file is part of the CS342 2023 PAWS Team Application project
+# This source file is part of the PAWS application based on the Stanford Spezi Template Application project
 #
 # SPDX-FileCopyrightText: 2023 Stanford University
 #
@@ -18,5 +18,4 @@ authors:
 - family-names: "Aalami"
   given-names: "Oliver"
   orcid: "https://orcid.org/0000-0002-7799-2429"
-title: "CS342 2023 PAWS Team Application"
-url: "https://github.com/CS342/2023-PAWS"
+title: "PAWS"

CONTRIBUTORS.md

@@ -1,14 +1,27 @@
 <!--
 
-This source file is part of the CS342 2023 PAWS Team Application project
+This source file is part of the PAWS application based on the Stanford Spezi Template Application project
 
 SPDX-FileCopyrightText: 2023 Stanford University
 
 SPDX-License-Identifier: MIT
 
 -->
 
-CS342 2023 PAWS Team Application Contributors
+PAWS Contributors
 =================================
 
 * [Paul Schmiedmayer](https://github.com/PSchmiedmayer)
+* [Andreas Bauer](https://github.com/Supereg)
+* [Philipp Zagar](https://github.com/philippzagar)
+* [Nikolai Madlener](https://github.com/NikolaiMadlener)
+* [Caitlin Kunchur](https://github.com/ckunchur)
+* [Shriya Reddy](https://github.com/reddyrose)
+* [Riya Karumanchi](https://github.com/riyakaru)
+* [Vishnu Ravi](https://github.com/vishnuravi)
+* [Ananya Vasireddy](https://github.com/ananya-vasireddy)
+* [Abhinav Agarwal](https://github.com/abhinav30219)
+* [Raghav Samavedam](https://github.com/RSamavedam)
+* [Aydin Zahedivash](http://github.com/aydinzahedi)
+* [Scott Randolph Ceresnak](https://med.stanford.edu/profiles/scott-ceresnak)
+* [Oliver Aalami](http://github.com/aalami5)

Gemfile

@@ -1,5 +1,5 @@
 #
-# This source file is part of the CS342 2023 PAWS Team Application project
+# This source file is part of the PAWS application based on the Stanford Spezi Template Application project
 #
 # SPDX-FileCopyrightText: 2023 Stanford University
 #