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Update temp.py
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JMante1 authored Oct 6, 2022
1 parent 9e60a02 commit 5e334b6
Showing 1 changed file with 2 additions and 4 deletions.
6 changes: 2 additions & 4 deletions excel2flapjack/excel2flapjack/temp.py
Original file line number Diff line number Diff line change
Expand Up @@ -11,8 +11,6 @@
'tests', 'test_files')
excel_path = os.path.join(test_file_path, "flapjack_excel_converter_v030.xlsx")

shm = {'Study1': 'https://synbiohub.org/user/JVM/Flapjack/Study1/1', 'Assay1': 'https://synbiohub.org/user/JVM/Flapjack/Assay1/1', 'Assay2': 'https://synbiohub.org/user/JVM/Flapjack/Assay2/1', 'Sample1': 'https://synbiohub.org/user/JVM/Flapjack/Sample1/1', 'Sample2': 'https://synbiohub.org/user/JVM/Flapjack/Sample2/1', 'Sample3': 'https://synbiohub.org/user/JVM/Flapjack/Sample3/1', 'Sample4': 'https://synbiohub.org/user/JVM/Flapjack/Sample4/1', 'M9Glucose': 'https://synbiohub.org/user/JVM/Flapjack/M9Glucose/1', 'Signal1': 'https://synbiohub.org/user/JVM/Flapjack/Signal1/1', 'Signal9': 'https://synbiohub.org/user/JVM/Flapjack/Signal9/1', 'EcoliT7': 'https://synbiohub.org/user/JVM/Flapjack/EcoliT7/1', 'Rep_HIGH_degrate_plasmid': 'https://synbiohub.org/user/JVM/Flapjack/Rep_HIGH_degrate_plasmid/1', 'Rep_LOW_degrate_plasmid': 'https://synbiohub.org/user/JVM/Flapjack/Rep_LOW_degrate_plasmid/1', 'DNA1': 'https://synbiohub.org/user/JVM/Flapjack/DNA1/1', 'DNA2': 'https://synbiohub.org/user/JVM/Flapjack/DNA2/1', 'DNA3': 'https://synbiohub.org/user/JVM/Flapjack/DNA3/1'}

hash_map = e2f.flapjack_upload(fj_url, fj_user, fj_pass, excel_path, sbol_hash_map=shm,
add_sbol_uris=True, flapjack_override=True, print_progress=True)
hash_map = e2f.flapjack_upload(fj_url, fj_user, fj_pass, excel_path, sbol_hash_map={},
add_sbol_uris=False, flapjack_override=True, print_progress=True)
print(hash_map)

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