add export version to containers

.github/workflows/publish_doc.yaml

@@ -51,6 +51,7 @@ jobs:
           dcm2bids -h > docs_helper/help.txt
           dcm2bids_helper -h > docs_helper/helper.txt
           dcm2bids_scaffold -h > docs_helper/help_scaffold.txt
+          echo "export VERSION=$(dcm2bids -v | awk '/dcm2bids/ {print $3}')" > docs_helper/version.txt
 
       - name: Set git credentials
         run: |

.gitignore

@@ -139,3 +139,4 @@ tests/data/*
 docs_helper/help.txt
 docs_helper/help_scaffold.txt
 docs_helper/helper.txt
+docs_helper/version.txt

docs/get-started/install.md

@@ -16,11 +16,17 @@ You can install it using [Docker][docker] or [Apptainer/Singularity][apptainer].
 
 === "Docker"
 
-    `docker pull unfmontreal/dcm2bids:${VERSION}`
+    ```
+    --8<-- "docs_helper/version.txt"
+    docker pull unfmontreal/dcm2bids:${VERSION}
+    ```
 
 === "Apptainer/Singularity"
 
-    `apptainer pull dcm2bids_${VERSION}.sif docker://unfmontreal/dcm2bids:${VERSION}`
+    ```
+    --8<-- "docs_helper/version.txt"
+    apptainer pull dcm2bids.sif docker://unfmontreal/dcm2bids:${VERSION}
+    ```
 
 ## Installing binary executables
 

docs/how-to/container.md

@@ -19,15 +19,19 @@ Before you begin, make sure you have at least one of the following installed:
 
 To start, you can either pull the dcm2bids image from the Docker Hub repository or [build it from the Dockerfile in the repository](https://github.com/UNFmontreal/Dcm2Bids/blob/dev/Dockerfile).:
 
+
+
 === "Docker"
 
     ```
+    --8<-- "docs_helper/version.txt"
     docker pull unfmontreal/dcm2bids:${VERSION}
     ```
 
 === "Apptainer/Singularity"
 
     ```
+    --8<-- "docs_helper/version.txt"
     apptainer pull dcm2bids_${VERSION}.sif docker://unfmontreal/dcm2bids:${VERSION}
     ```
 
@@ -38,7 +42,7 @@ The default command, or the point of entry, for the container is `dcm2bids`. So
 === "Docker"
 
     ```
-    docker run --rm -it unfmontreal/dcm2bids:latest --help
+    docker run --rm -it unfmontreal/dcm2bids:${VERSION} --help
     ```
 
 === "Apptainer/Singularity"