tired_v5 #11
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on: | |
push: | |
branches: [main, master] | |
pull_request: | |
branches: [main, master] | |
release: | |
types: [published] | |
workflow_dispatch: | |
permissions: read-all | |
jobs: | |
pkgdown: | |
runs-on: ubuntu-latest | |
# Only restrict concurrency for non-PR jobs | |
concurrency: | |
group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }} | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
permissions: | |
contents: write | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
use-public-rspm: true | |
- name: Install required R packages | |
run: | | |
install.packages(c('remotes', 'devtools'), repos = 'https://cloud.r-project.org/') | |
shell: Rscript {0} | |
# Install dependencies, including EveTemplate | |
- name: Install EveTemplate package | |
run: | | |
remotes::install_github("neuroconductor/EveTemplate") | |
shell: Rscript {0} | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
R_LIBS_USER: /home/runner/work/_temp/Library | |
TZ: UTC | |
_R_CHECK_SYSTEM_CLOCK_: FALSE | |
NOT_CRAN: true | |
RSPM: https://packagemanager.posit.co/cran/__linux__/jammy/latest | |
RENV_CONFIG_REPOS_OVERRIDE: https://packagemanager.posit.co/cran/__linux__/jammy/latest | |
- name: Install extrantsr package | |
run: | | |
devtools::install_github("muschellij2/extrantsr") | |
shell: Rscript {0} | |
- name: Install fslr package | |
run: | | |
devtools::install_github("muschellij2/fslr") | |
shell: Rscript {0} | |
- name: Install ANTsR package | |
run: | | |
devtools::install_github('ANTsX/ANTsR') | |
shell: Rscript {0} | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
extra-packages: any::pkgdown, local::. | |
needs: website | |
- name: Build site | |
run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE) | |
shell: Rscript {0} | |
- name: Deploy to GitHub pages 🚀 | |
if: github.event_name != 'pull_request' | |
uses: JamesIves/[email protected] | |
with: | |
clean: false | |
branch: gh-pages | |
folder: docs |