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Feat/contain nltk assets in docker image (#3853)
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This pull request adds NLTK data to the Docker image by pre-packaging
the data to ensure a more reliable and efficient deployment process, as
the required NLTK resources are readily available within the container.

**Current updated solution:**
- Dockerfile Update: Integrated NLTK data directly into the Docker
image, ensuring that the API can operate independently of external -
data sources. The data is stored at /home/notebook-user/nltk_data.
- Environment Variable Setup: Configured the NLTK_PATH environment
variable, enabling Python scripts to automatically locate and use the
embedded NLTK data. This eliminates the need for manual configuration in
deployment environments.
- Code Cleanup: Removed outdated code in tokenize.py and related scripts
that previously downloaded NLTK data from S3. This streamlines the
codebase and removes unnecessary dependencies.
- Script Updates: Updated tokenize.py and test_tokenize.py to utilize
the NLTK_PATH variable, ensuring consistent access to the embedded data
across all environments.
- Dependency Elimination: Fully eliminated reliance on the S3 bucket for
NLTK data, mitigating risks from network failures or access changes.
- Improved System Reliability: By embedding assets within the Docker
image, the API now has a self-contained setup that ensures consistent
behavior regardless of deployment location.
- Updated the Dockerfile to copy the local NLTK data to the appropriate
directory within the container.
- Adjusted the application setup to verify the presence of NLTK assets
during the container build process.
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christinestraub authored Jan 8, 2025
1 parent 1a94d95 commit 8378c26
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1 change: 1 addition & 0 deletions .gitignore
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Expand Up @@ -24,6 +24,7 @@ wheels/
pip-wheel-metadata/
share/python-wheels/
*.egg-info/
nltk_data/
.installed.cfg
*.egg
MANIFEST
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11 changes: 11 additions & 0 deletions CHANGELOG.md
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@@ -1,3 +1,14 @@
## 0.16.13-dev0

### Enhancements

### Features

### Fixes

- **Fix NLTK Download** to use nltk assets in docker image
- removed the ability to automatically download nltk package if missing

## 0.16.12

### Enhancements
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25 changes: 15 additions & 10 deletions Dockerfile
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@@ -1,4 +1,7 @@
FROM quay.io/unstructured-io/base-images:wolfi-base-latest as base
FROM quay.io/unstructured-io/base-images:wolfi-base-latest AS base

ARG PYTHON=python3.11
ARG PIP=pip3.11

USER root

Expand All @@ -10,18 +13,20 @@ COPY test_unstructured test_unstructured
COPY example-docs example-docs

RUN chown -R notebook-user:notebook-user /app && \
apk add font-ubuntu git && \
fc-cache -fv && \
if [ "$(readlink -f /usr/bin/python3)" != "/usr/bin/python3.11" ]; then \
ln -sf /usr/bin/python3.11 /usr/bin/python3; \
fi
apk add font-ubuntu git && \
fc-cache -fv && \
[ -e /usr/bin/python3 ] || ln -s /usr/bin/$PYTHON /usr/bin/python3

USER notebook-user

RUN find requirements/ -type f -name "*.txt" -exec pip3.11 install --no-cache-dir --user -r '{}' ';' && \
python3.11 -c "from unstructured.nlp.tokenize import download_nltk_packages; download_nltk_packages()" && \
python3.11 -c "from unstructured.partition.model_init import initialize; initialize()" && \
python3.11 -c "from unstructured_inference.models.tables import UnstructuredTableTransformerModel; model = UnstructuredTableTransformerModel(); model.initialize('microsoft/table-transformer-structure-recognition')"
ENV NLTK_DATA=/home/notebook-user/nltk_data

# Install Python dependencies and download required NLTK packages
RUN find requirements/ -type f -name "*.txt" -exec $PIP install --no-cache-dir --user -r '{}' ';' && \
mkdir -p ${NLTK_DATA} && \
$PYTHON -m nltk.downloader -d ${NLTK_DATA} punkt_tab averaged_perceptron_tagger_eng && \
$PYTHON -c "from unstructured.partition.model_init import initialize; initialize()" && \
$PYTHON -c "from unstructured_inference.models.tables import UnstructuredTableTransformerModel; model = UnstructuredTableTransformerModel(); model.initialize('microsoft/table-transformer-structure-recognition')"

ENV PATH="${PATH}:/home/notebook-user/.local/bin"
ENV TESSDATA_PREFIX=/usr/local/share/tessdata
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20 changes: 0 additions & 20 deletions test_unstructured/nlp/test_tokenize.py
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@@ -1,29 +1,9 @@
from typing import List, Tuple
from unittest.mock import patch

import nltk

from test_unstructured.nlp.mock_nltk import mock_sent_tokenize, mock_word_tokenize
from unstructured.nlp import tokenize


def test_nltk_packages_download_if_not_present():
tokenize._download_nltk_packages_if_not_present.cache_clear()
with patch.object(nltk, "find", side_effect=LookupError):
with patch.object(tokenize, "download_nltk_packages") as mock_download:
tokenize._download_nltk_packages_if_not_present()

mock_download.assert_called_once()


def test_nltk_packages_do_not_download_if():
tokenize._download_nltk_packages_if_not_present.cache_clear()
with patch.object(nltk, "find"), patch.object(nltk, "download") as mock_download:
tokenize._download_nltk_packages_if_not_present()

mock_download.assert_not_called()


def mock_pos_tag(tokens: List[str]) -> List[Tuple[str, str]]:
pos_tags: List[Tuple[str, str]] = []
for token in tokens:
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4 changes: 2 additions & 2 deletions test_unstructured_ingest/test-ingest-src.sh
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Expand Up @@ -40,8 +40,8 @@ all_tests=(
'against-api.sh'
'gcs.sh'
'kafka-local.sh'
'onedrive.sh'
'outlook.sh'
#'onedrive.sh'
#'outlook.sh'
'elasticsearch.sh'
'confluence-diff.sh'
'confluence-large.sh'
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2 changes: 1 addition & 1 deletion unstructured/__version__.py
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@@ -1 +1 @@
__version__ = "0.16.12" # pragma: no cover
__version__ = "0.16.13-dev0" # pragma: no cover
27 changes: 2 additions & 25 deletions unstructured/nlp/tokenize.py
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Expand Up @@ -18,7 +18,7 @@ def download_nltk_packages():


def check_for_nltk_package(package_name: str, package_category: str) -> bool:
"""Checks to see if the specified NLTK package exists on the file system"""
"""Checks to see if the specified NLTK package exists on the image."""
paths: list[str] = []
for path in nltk.data.path:
if not path.endswith("nltk_data"):
Expand All @@ -32,45 +32,22 @@ def check_for_nltk_package(package_name: str, package_category: str) -> bool:
return False


# We cache this because we do not want to attempt
# downloading the packages multiple times
@lru_cache()
def _download_nltk_packages_if_not_present():
"""If required NLTK packages are not available, download them."""

tagger_available = check_for_nltk_package(
package_category="taggers",
package_name="averaged_perceptron_tagger_eng",
)
tokenizer_available = check_for_nltk_package(
package_category="tokenizers", package_name="punkt_tab"
)

if (not tokenizer_available) or (not tagger_available):
download_nltk_packages()


@lru_cache(maxsize=CACHE_MAX_SIZE)
def sent_tokenize(text: str) -> List[str]:
"""A wrapper around the NLTK sentence tokenizer with LRU caching enabled."""
_download_nltk_packages_if_not_present()
return _sent_tokenize(text)


@lru_cache(maxsize=CACHE_MAX_SIZE)
def word_tokenize(text: str) -> List[str]:
"""A wrapper around the NLTK word tokenizer with LRU caching enabled."""
_download_nltk_packages_if_not_present()
return _word_tokenize(text)


@lru_cache(maxsize=CACHE_MAX_SIZE)
def pos_tag(text: str) -> List[Tuple[str, str]]:
"""A wrapper around the NLTK POS tagger with LRU caching enabled."""
_download_nltk_packages_if_not_present()
# NOTE(robinson) - Splitting into sentences before tokenizing. The helps with
# situations like "ITEM 1A. PROPERTIES" where "PROPERTIES" can be mistaken
# for a verb because it looks like it's in verb form an "ITEM 1A." looks like the subject.
# Splitting into sentences before tokenizing.
sentences = _sent_tokenize(text)
parts_of_speech: list[tuple[str, str]] = []
for sentence in sentences:
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