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Updates to readme
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cflerin committed Apr 7, 2021
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Additional resources
--------------------

For more information, please visit LCB_, or SCENIC_ (R version).
For more information, please visit the main SCENIC_ website.
There is a tutorial to `create new cisTarget databases <https://github.com/aertslab/create_cisTarget_databases>`_.
The CLI to pySCENIC has also been streamlined into a pipeline that can be run with a single command, using the Nextflow workflow manager.
There are two Nextflow implementations available:

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.. _dask: https://dask.pydata.org/en/latest/
.. _distributed: https://distributed.readthedocs.io/en/latest/
.. _arboreto: https://arboreto.readthedocs.io
.. _LCB: https://aertslab.org
.. _`SCENICprotocol`: https://github.com/aertslab/SCENICprotocol
.. _`VSNPipelines`: https://github.com/vib-singlecell-nf/vsn-pipelines
.. _notebooks: https://github.com/aertslab/pySCENIC/tree/master/notebooks
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