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Bump myst-parser from 1.0.0 to 3.0.1 #1875

Bump myst-parser from 1.0.0 to 3.0.1

Bump myst-parser from 1.0.0 to 3.0.1 #1875

Workflow file for this run

name: Main
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
on:
pull_request:
branches:
- "*"
push:
branches:
- main
tags:
- "v*.*.*"
env:
CACHE_PREFIX: v5 # Change this to invalidate existing cache.
PYTHON_PATH: ./
DEFAULT_PYTHON: 3.9
WANDB_API_KEY: ${{ secrets.WANDB_API_KEY }}
BEAKER_TOKEN: ${{ secrets.BEAKER_TOKEN }}
BEAKER_WORKSPACE: ai2/tango-testing
BEAKER_IMAGE: petew/tango-testing
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
jobs:
checks:
name: python ${{ matrix.python }} - ${{ matrix.task.name }}
runs-on: [ubuntu-latest]
timeout-minutes: 30
permissions:
contents: "read"
id-token: "write"
strategy:
fail-fast: false
matrix:
python: ["3.9"]
task:
- name: Lint
extras: dev,all
requires_torch: true
run: |
ruff check .
- name: Type check
extras: dev,all
requires_torch: true
run: |
mypy --check-untyped-defs .
- name: Build
extras: dev,all
requires_torch: true
run: |
tango --version
python -m build
- name: Style
extras: dev
requires_torch: false
run: |
isort --check .
black --check .
- name: Docs
extras: dev,all
requires_torch: true
run: |
cd docs && make html SPHINXOPTS="-W --keep-going"
- name: Test
extras: dev
requires_torch: false
run: |
pytest -v --durations=10 --color=yes --doctest-modules --ignore=tests/integrations --ignore=tango/integrations tests/ tango/
- name: Datasets integration
extras: dev,datasets
requires_torch: false
run: |
pytest -v --color=yes --doctest-modules tango/integrations/datasets tests/integrations/datasets
- name: PyTorch integration
extras: dev,torch
requires_torch: true
run: |
pytest -v --color=yes --doctest-modules tango/integrations/torch tests/integrations/torch
- name: Transformers integration
extras: dev,flax,transformers
requires_torch: true
run: |
pytest -v --color=yes --doctest-modules tango/integrations/transformers tests/integrations/transformers
- name: FairScale integration
extras: dev,fairscale
requires_torch: true
run: |
pytest -v --color=yes --doctest-modules tango/integrations/fairscale tests/integrations/fairscale
- name: W&B integration
extras: dev,torch,flax,wandb
requires_torch: true
run: |
pytest -v --color=yes --doctest-modules tango/integrations/wandb tests/integrations/wandb
- name: Beaker integration
extras: dev,beaker
requires_torch: false
run: |
pytest -v --color=yes --doctest-modules tango/integrations/beaker tests/integrations/beaker
- name: Flax integration
extras: dev,flax,transformers
requires_torch: false
run: |
pytest -v --color=yes --doctest-modules tango/integrations/flax tests/integrations/flax
- name: GS integration
extras: dev,gs
requires_torch: false
run: |
pytest -v --color=yes --doctest-modules tango/integrations/gs tests/integrations/gs
- name: Example - train_lm
extras: dev,all
requires_torch: true
run: |
cd examples/train_lm
pytest -v --color=yes test.py
include:
# Run the core tests on other Python versions as well.
- task:
name: Test
extras: dev
requires_torch: false
run: |
pytest -v --durations=10 --color=yes --doctest-modules --ignore=tests/integrations --ignore=tango/integrations tests/ tango/
python: "3.8"
- task:
name: Test
extras: dev
requires_torch: false
run: |
pytest -v --durations=10 --color=yes --doctest-modules --ignore=tests/integrations --ignore=tango/integrations tests/ tango/
python: "3.10"
steps:
- uses: "actions/checkout@v3"
- name: Checkout
if: github.event_name != 'pull_request'
uses: actions/checkout@v3
# For pull requests we need to checkout the HEAD commit instead of the merge
# commit since some tests depend on having an existing commit.
- name: Checkout (pull request)
if: github.event_name == 'pull_request'
uses: actions/checkout@v3
with:
ref: ${{ github.event.pull_request.head.sha }}
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python }}
- name: Install prerequisites
run: |
pip install --upgrade pip setuptools wheel virtualenv
- name: Set build variables
shell: bash
run: |
set -e
# Get the exact Python version to use in the cache key.
echo "PYTHON_VERSION=$(python --version)" >> $GITHUB_ENV
echo "RUNNER_ARCH=$(uname -m)" >> $GITHUB_ENV
# Use week number in cache key so we can refresh the cache weekly.
echo "WEEK_NUMBER=$(date +%V)" >> $GITHUB_ENV
echo "EXTRAS_HASH=$(python scripts/hash_extras.py ${{ matrix.task.extras }})" >> $GITHUB_ENV
- uses: actions/cache@v3
id: virtualenv-cache
with:
path: .venv
key: ${{ env.CACHE_PREFIX }}-${{ env.WEEK_NUMBER }}-${{ runner.os }}-${{ env.RUNNER_ARCH }}-${{ env.PYTHON_VERSION }}-${{ env.EXTRAS_HASH }}-${{ hashFiles('pyproject.toml') }}
- name: Setup virtual environment (no cache hit)
if: steps.virtualenv-cache.outputs.cache-hit != 'true'
run: |
test -d .venv || virtualenv -p $(which python) --copies --reset-app-data .venv
# Reference: https://github.com/marketplace/actions/authenticate-to-google-cloud#setup
- name: Authenticate to Google Cloud
if: matrix.task.name == 'GS integration'
uses: "google-github-actions/auth@v1"
with:
workload_identity_provider: "projects/10554368204/locations/global/workloadIdentityPools/tango-ci-pool/providers/tango-ci-provider"
service_account: "[email protected]"
- name: Pre-install torch
if: steps.virtualenv-cache.outputs.cache-hit != 'true' && (contains(matrix.task.extras, 'torch') || contains(matrix.task.extras, 'all') || matrix.task.requires_torch)
run: |
. .venv/bin/activate
pip install torch==2.0.0 --extra-index-url https://download.pytorch.org/whl/cpu
- name: Pre-install flax
if: steps.virtualenv-cache.outputs.cache-hit != 'true' && (contains(matrix.task.extras, 'flax') || contains(matrix.task.extras, 'all'))
run: |
. .venv/bin/activate
pip install flax jax jaxlib "tensorflow-cpu>=2.9.1" optax
- name: Install editable (no cache hit)
if: steps.virtualenv-cache.outputs.cache-hit != 'true'
run: |
. .venv/bin/activate
pip install -e .[${{ matrix.task.extras }}]
- name: Install editable (cache hit)
if: steps.virtualenv-cache.outputs.cache-hit == 'true'
run: |
. .venv/bin/activate
pip install --no-deps -e .[${{ matrix.task.extras }}]
- name: Show environment info
run: |
. .venv/bin/activate
echo "========= Python location ==========="
which python
echo "========= Python version ============"
python --version
echo "========= Python packages ==========="
pip freeze
echo "========= Tango installation ========"
tango info
- name: ${{ matrix.task.name }}
run: |
. .venv/bin/activate
${{ matrix.task.run }}
- name: Upload package distribution files
if: matrix.task.name == 'Build' && matrix.python == env.DEFAULT_PYTHON
uses: actions/upload-artifact@v3
with:
name: package
path: dist
- name: Upload docs build
if: matrix.task.name == 'Docs' && matrix.python == env.DEFAULT_PYTHON
uses: actions/upload-artifact@v3
with:
name: docs
path: docs/build
- name: Clean up
if: always()
run: |
. .venv/bin/activate
pip uninstall -y ai2-tango
gpu_tests:
name: GPU Tests
runs-on: ubuntu-latest
steps:
- name: Determine current commit SHA (pull request)
if: github.event_name == 'pull_request'
run: |
echo "COMMIT_SHA=${{ github.event.pull_request.head.sha }}" >> $GITHUB_ENV
- name: Determine current commit SHA (push)
if: github.event_name != 'pull_request'
run: |
echo "COMMIT_SHA=$GITHUB_SHA" >> $GITHUB_ENV
- name: GPU Tests
uses: allenai/[email protected]
with:
spec: |
version: v2
description: GPU Tests
budget: ai2/oe-training
tasks:
- name: tests
image:
beaker: ${{ env.BEAKER_IMAGE }}
context:
preemptible: true
resources:
gpuCount: 2
envVars:
- name: COMMIT_SHA
value: ${{ env.COMMIT_SHA }}
command: ["/entrypoint.sh", "pytest", "-v", "-m", "gpu", "tests/"]
result:
path: /unused
token: ${{ secrets.BEAKER_TOKEN }}
workspace: ${{ env.BEAKER_WORKSPACE }}
clusters: ai2/general-cirrascale,ai2/allennlp-cirrascale,ai2/aristo-cirrascale,ai2/mosaic-cirrascale,ai2/s2-cirrascale
release:
name: Release
runs-on: ubuntu-latest
needs: [gpu_tests, checks]
if: startsWith(github.ref, 'refs/tags/')
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: ${{ env.DEFAULT_PYTHON }}
- name: Install requirements
run: |
pip install -e .[dev]
- name: Prepare environment
run: |
echo "RELEASE_VERSION=${GITHUB_REF#refs/tags/v}" >> $GITHUB_ENV
echo "TAG=${GITHUB_REF#refs/tags/}" >> $GITHUB_ENV
- name: Download package distribution files
uses: actions/download-artifact@v3
with:
name: package
path: dist
- name: Generate release notes
run: |
python scripts/release_notes.py > ${{ github.workspace }}-RELEASE_NOTES.md
- name: Publish package to PyPI
run: |
twine upload -u __token__ -p ${{ secrets.PYPI_PASSWORD }} dist/*
- name: Publish GitHub release
uses: softprops/action-gh-release@v1
with:
body_path: ${{ github.workspace }}-RELEASE_NOTES.md
prerelease: ${{ contains(env.TAG, 'rc') }}
files: |
dist/*