Sequence Logo

Need to install python packages

pip3 install weblogo Biopython argparse

To run script:

python3 script/create_blaEC_logo.py --email [email protected]

Docker

Create docker image

docker build -t seq_logo -f DockerFile .

Run Docker container

docker run --rm -it -v $(pwd)/example_data:/workspace/example_data seq_logo:latest [email protected]

Sequence Logo Output