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from datetime import datetime | ||
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import omics.cli.run_analyzer.timeline as timeline | ||
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def test_parse_time_str(): | ||
# Test datetime input | ||
dt = datetime(2023, 1, 1, 12, 0, 0) | ||
assert timeline._parse_time_str(dt) == dt | ||
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# Test string with milliseconds | ||
time_str = "2023-01-01T12:00:00.123Z" | ||
expected = datetime(2023, 1, 1, 12, 0, 0, 123000) | ||
assert timeline._parse_time_str(time_str) == expected | ||
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# Test string without milliseconds | ||
time_str = "2023-01-01T12:00:00Z" | ||
expected = datetime(2023, 1, 1, 12, 0, 0) | ||
assert timeline._parse_time_str(time_str) == expected | ||
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def test_time_factors(): | ||
assert timeline.TIME_SCALE_FACTORS["min"] == 1 / 60, "Minutes scale factor incorrect" | ||
assert timeline.TIME_SCALE_FACTORS["hr"] == 1 / 3600, "Hours scale factor incorrect" | ||
assert timeline.TIME_SCALE_FACTORS["day"] == 1 / 86400, "Days scale factor incorrect" | ||
assert timeline.TIME_SCALE_FACTORS["sec"] == 1, "Seconds scale factor incorrect" | ||
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def test_get_task_timings_data(): | ||
# Test empty task list | ||
assert timeline._get_task_timings_data([]).empty | ||
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# Test tasks missing required timing fields | ||
tasks_missing_fields = [ | ||
{"creationTime": "2023-01-01T00:00:00.000Z"}, | ||
{"startTime": "2023-01-01T00:00:00.000Z"}, | ||
{"stopTime": "2023-01-01T00:00:00.000Z"}, | ||
] | ||
assert timeline._get_task_timings_data(tasks_missing_fields).empty | ||
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# Test valid tasks | ||
valid_tasks = [ | ||
{ | ||
"creationTime": "2023-01-01T00:00:00.000Z", | ||
"startTime": "2023-01-01T00:01:00.000Z", | ||
"stopTime": "2023-01-01T00:02:00.000Z", | ||
"status": "COMPLETED", | ||
"arn": "arn1", | ||
"name": "task1", | ||
"cpus": 2, | ||
"gpus": 1, | ||
"memory": 4, | ||
"instanceType": "t2.micro", | ||
"metrics": {"estimatedUSD": 0.50}, | ||
}, | ||
{ | ||
"creationTime": "2023-01-01T00:02:00.000Z", | ||
"startTime": "2023-01-01T00:03:00.000Z", | ||
"stopTime": "2023-01-01T00:04:00.000Z", | ||
"status": "FAILED", | ||
"arn": "arn2", | ||
"name": "task2", | ||
}, | ||
] | ||
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df = timeline._get_task_timings_data(valid_tasks) | ||
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# Test dataframe shape and content | ||
assert len(df) == 2 | ||
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assert sorted(df.columns) == sorted( | ||
[ | ||
"creationTime", | ||
"startTime", | ||
"stopTime", | ||
"cpus", | ||
"gpus", | ||
"memory", | ||
"instanceType", | ||
"y", | ||
"color", | ||
"running_left", | ||
"running_right", | ||
"running_duration", | ||
"starting_left", | ||
"starting_right", | ||
"starting_duration", | ||
"label", | ||
"text_x", | ||
"estimatedUSD", | ||
"arn", | ||
"name", | ||
"status", | ||
"metrics", | ||
] | ||
) | ||
# Test default values | ||
assert df.iloc[1]["cpus"] == 0 | ||
assert df.iloc[1]["gpus"] == 0 | ||
assert df.iloc[1]["memory"] == 0 | ||
assert df.iloc[1]["instanceType"] == "N/A" | ||
assert df.iloc[1]["estimatedUSD"] == 0.0 | ||
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# Test time calculations | ||
assert df.iloc[0]["running_duration"] == 1.0 # 1 minute | ||
assert df.iloc[0]["starting_duration"] == 1.0 # 1 minute | ||
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# Test color mapping | ||
assert df.iloc[0]["color"] == timeline.TASK_COLORS["COMPLETED"] | ||
assert df.iloc[1]["color"] == timeline.TASK_COLORS["FAILED"] | ||
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# Test with different time units | ||
df_hours = timeline._get_task_timings_data(valid_tasks, time_units="hr") | ||
assert df_hours.iloc[0]["running_duration"] == 1.0 / 60 # 1 minute in hours |