Skip to content

Issues: bensutherland/simple_pop_stats

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

26 Open 9 Closed
26 Open 9 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Ghostscript not in path
#31 opened Sep 29, 2021 by erondeau
@erondeau @JanineSupernault
Capitalization of headers - more flexibility? enhancement New feature or request
#30 opened Jun 18, 2021 by erondeau
@erondeau
Repunit filenames need to be constant for all species and added as variable to launch script enhancement New feature or request
#28 opened Apr 6, 2021 by bensutherland
1
Reduce width of simulation table and make portrait from landscape enhancement New feature or request
#27 opened Mar 17, 2021 by bensutherland
@erondeau
Left justify changes and notes tables in benchmark enhancement New feature or request
#26 opened Mar 16, 2021 by bensutherland
@erondeau
Benchmark PDF name enhancement New feature or request
#25 opened Mar 16, 2021 by bensutherland
@erondeau
Benchmark PDF is sent to github folder not target enhancement New feature or request
#24 opened Mar 4, 2021 by bensutherland
PPN file example needed in README for Realistic Fishery Scenario
#23 opened Feb 17, 2021 by bensutherland
Realistic Fishery Scenario does not show all populations, only those set in the ppn file with non-zero
#22 opened Feb 17, 2021 by bensutherland
Order by repunits in plot_summarize_100_sim() not yet working for microsatellites bug Something isn't working
#21 opened Feb 9, 2021 by bensutherland
@bensutherland
Automate building of the folder structure for starting a new benchmark folder
#20 opened Feb 9, 2021 by bensutherland
Automate copy paste rename of benchmark into the reference database folder
#19 opened Feb 9, 2021 by bensutherland
Minimum number of genotypes/individual
#18 opened Feb 2, 2021 by JanineSupernault
@bensutherland
pca_from_genind.r not using default colour option. bug Something isn't working enhancement New feature or request
#17 opened Jan 26, 2021 by erondeau
1
Need stand-alone function to screen rubias file for a percentage or total number missing loci (micro and rubias) enhancement New feature or request
#16 opened Jan 13, 2021 by bensutherland
@bensutherland
Baseline benchmarks: how to deal with same baseline but multiple grouping levels help wanted Extra attention is needed
#15 opened Dec 30, 2020 by bensutherland
Need method to convert geneclass/genepop mix file to rubias input enhancement New feature or request
#13 opened Dec 23, 2020 by bensutherland
@bensutherland
genepop_to_rubias() not describing properly when collections are duplicated. bug Something isn't working help wanted Extra attention is needed invalid This doesn't seem right
#12 opened Dec 21, 2020 by erondeau
@bensutherland @erondeau
1
drop_pops() not actually dropping pops bug Something isn't working
#11 opened Dec 11, 2020 by erondeau
@erondeau
3
on_network variable not being recognizing, causes select_species to fail bug Something isn't working
#10 opened Nov 19, 2020 by bensutherland
@bensutherland
1
Benchmark folder structure is not yet constructed to handle both microsatellite and SNP data enhancement New feature or request
#9 opened Oct 21, 2020 by bensutherland
2
Need to save output filenames with whether SNP or msat so don't overwrite previous file enhancement New feature or request
#6 opened Oct 10, 2019 by bensutherland
1
Need to output amova results to file, not just as object in R env enhancement New feature or request
#5 opened Oct 10, 2019 by bensutherland
Need to only retain one data point per pairwise contrast in compare_physical_genetic dist enhancement New feature or request
#3 opened Aug 6, 2019 by bensutherland
@bensutherland
PCA_from_genind fails if there is a typo in the colour dataframe bug Something isn't working
#2 opened Aug 6, 2019 by bensutherland
@bensutherland
ProTip! Add no:assignee to see everything that’s not assigned.