update scrnaseq yaml

biom262 · Jan 29, 2024 · 34dfccc · 34dfccc
1 parent 968c5c5
commit 34dfccc
Showing 1 changed file with 7 additions and 3 deletions.
diff --git a/scrna-seq.yml b/scrna-seq.yml
@@ -5,13 +5,17 @@ channels:
   - nodefaults
 dependencies:
   - conda-forge::python=3.8
+  - conda-forge::pandas==1.5
+  - conda-forge::matplotlib==3.6.3
   - conda-forge::seaborn==0.11.2
   - conda-forge::pytables==3.7.0
   - conda-forge::scikit-learn==1.0.2
   - conda-forge::statsmodels==0.13.2
   - conda-forge::numba==0.55.1
-  - conda-forge::python-igraph==0.9.9
-  - conda-forge::leidenalg==0.8.9
+  - conda-forge::python-igraph==0.10.6
+  - conda-forge::leidenalg==0.10.1
   - conda-forge::ipykernel==6.9.1
   - conda-forge::scanpy==1.8.2
-  - conda-forge::louvain==0.7.1
+  - conda-forge::louvain==0.8.1
+  - bioconda::scrublet==0.2.3
+  - bioconda::gprofiler-official==1.0.0