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Merge pull request #419 from biosustain/print_more_debug_info
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Feat: print more debug info on steady state failure
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teddygroves authored Jun 6, 2023
2 parents dfeeefe + a318c42 commit 1bd55c5
Showing 1 changed file with 11 additions and 0 deletions.
11 changes: 11 additions & 0 deletions src/maud/stan/model.stan
Original file line number Diff line number Diff line change
Expand Up @@ -251,17 +251,28 @@ transformed parameters {
print("flux_train: ", flux_train[e]);
print("conc_init: ", conc_init);
print("conc_unbalanced_train: ", conc_unbalanced_train[e]);
print("log_conc_unbalanced_train_z: ", log_conc_unbalanced_train_z[e]);
print("conc_enzyme_experiment: ", conc_enzyme_experiment);
print("log_conc_enzyme_train_z: ", log_conc_enzyme_train_z[e]);
print("km: ", km);
print("log_km_z: ", log_km_z);
print("drain_train: ", drain_train[e]);
print("drain_train_z: ", drain_train_z[e]);
print("kcat: ", kcat);
print("log_kcat_z: ", log_kcat_z);
print("dgr_train: ", dgr_train[e]);
print("ki: ", ki);
print("log_ki_z: ", log_ki_z);
print("dissociation_constant: ", dissociation_constant);
print("log_dissociation_constant_z: ", log_dissociation_constant_z);
print("transfer_constant: ", transfer_constant);
print("log_transfer_constant_z: ", log_transfer_constant_z);
print("kcat_pme: ", kcat_pme);
print("log_kcat_pme_z: ", log_kcat_pme_z);
print("conc_pme_experiment: ", conc_pme_experiment);
print("log_conc_pme_train_z: ", log_conc_pme_train_z[e]);
print("psi_train: ", psi_train);
print("psi_train_z: ", psi_train_z);
reject("Rejecting");
}
}
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