Notebooks for main analyis

blab · Nov 26, 2024 · 32f19a8 · 32f19a8
1 parent 39d641c
commit 32f19a8
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Showing 3 changed files with 4,951 additions and 2 deletions.
diff --git a/config/config.yaml b/config/config.yaml
@@ -35,8 +35,11 @@ analysis_period:
     pivot: "XBB.1.5"
     force_include: "defaults/xbb15/force_include_lineages.txt"
     predictor_names:
-      - 'spike pseudovirus DMS Non-RBD human sera escape relative to XBB.1.5'
-      - 'spike pseudovirus DMS Non-RBD ACE2 binding relative to XBB.1.5'
+      - "spike pseudovirus DMS human sera escape relative to XBB.1.5"
+      - "spike pseudovirus DMS ACE2 binding relative to XBB.1.5"
+      - "RBD yeast-display DMS ACE2 affinity relative to XBB.1.5"
+      - "RBD yeast-display DMS RBD expression relative to XBB.1.5"
+      - "RBD yeast-display DMS escape relative to XBB.1.5"
   xbb15_windowed:
     windowed: true
     obs_date_min: "2023-01-01"