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Organize datasets, beast output, and figures.
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sidneymbell committed May 9, 2017
1 parent 91b4a2e commit efa6d18
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Showing 174 changed files with 18,240 additions and 121,272 deletions.
18 changes: 9 additions & 9 deletions beast/compare_discreteTraits.csv
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196,Chimp_pts,Baboon,0.0522222222222,1.46564768358,0.0122125656948,0.05,0.499998947369,0.0107030457958,0.00550012790995,0.127200246837,0.000378231330687
50,Colobus_Monkey,Vervet,0.0451111111111,1.25664125309,0.0110651288057,0.0504,0.504211246397,0.0116452946732,0.0273471476081,0.646666514957,0.00289085433475
24,Western_red_colobus,Human,0.0404444444444,1.12116431808,0.0116726477752,0.0508,0.508427095615,0.0119055131901,0.0330007674597,0.784918175258,0.00318260454462
32,Mandrill,Chimp_ptt,0.032,0.879336004201,0.00727636385684,0.051,0.510536352947,0.0125874296933,0.0479150677923,1.15750612807,0.0174286677326
70,Chimp_ptt,Baboon,0.0468888888889,1.3086004759,0.0105889379384,0.051,0.510536352947,0.0120437624927,0.00460475825019,0.106397061863,0.000304591509987
73,Chimp_ptt,Colobus_Monkey,0.0326666666667,0.898274207622,0.00831756692548,0.051,0.510536352947,0.0112255869203,0.00539779994884,0.124820844288,0.000415534653089
96,Gorilla,Tantalus_Monkey,0.0535555555556,1.50518604195,0.01980099503,0.051,0.510536352947,0.0140768582563,0.0172422614479,0.403527397845,0.00231391658045
66,DeBrazzas_Monkey,Human,0.0457777777778,1.27610327335,0.0143528494761,0.051,0.510536352947,0.0131593825872,0.0213097979023,0.500794838471,0.00268393869844
70,Chimp_ptt,Baboon,0.0468888888889,1.3086004759,0.0105889379384,0.051,0.510536352947,0.0120437624927,0.00460475825019,0.106397061863,0.000304591509987
73,Chimp_ptt,Colobus_Monkey,0.0326666666667,0.898274207622,0.00831756692548,0.051,0.510536352947,0.0112255869203,0.00539779994884,0.124820844288,0.000415534653089
32,Mandrill,Chimp_ptt,0.032,0.879336004201,0.00727636385684,0.051,0.510536352947,0.0125874296933,0.0479150677923,1.15750612807,0.0174286677326
39,Mandrill,Sabaeus_Monkey,0.0333333333333,0.917238532699,0.00939787863926,0.0512,0.51264649951,0.0121190144111,0.562982860067,29.6295026793,0.451956733575
54,Colobus_Monkey,Tantalus_Monkey,0.0417777777778,1.15973736274,0.00946734570359,0.0516,0.516869462582,0.0130075673743,0.0225377334357,0.53031767437,0.00182172895749
21,Western_red_colobus,Sooty_Mangabey,0.0495555555556,1.3869037657,0.0150468115803,0.0518,0.518982280217,0.013525401757,0.0357892044001,0.853702654636,0.00453800671983
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25,Western_red_colobus,Sabaeus_Monkey,0.0746666666667,2.14639458793,0.0352956631333,0.063,0.638739579644,0.0194672758474,0.0330775134305,0.78680601681,0.00480843325439
200,Chimp_pts,DeBrazzas_Monkey,0.0271111111111,0.741248902795,0.0062445605613,0.064,0.649571565217,0.0168872640191,0.00636991557943,0.147444955502,0.000537218100144
168,Sabaeus_Monkey,Baboon,0.0784444444444,2.26423607695,0.0379670423841,0.0642,0.651740740357,0.0203014680038,0.0162189818368,0.379184226409,0.00512084525834
112,Sooty_Mangabey,Baboon,0.05,1.39999705263,0.0151613326877,0.0654,0.664775287313,0.0172310343742,0.00652340752111,0.151021230917,0.000675084296134
87,Gorilla,Colobus_Monkey,0.0793333333333,2.29210403055,0.0344769372002,0.0654,0.664775287313,0.0192375382967,0.0121002814019,0.281712950042,0.00163778570802
112,Sooty_Mangabey,Baboon,0.05,1.39999705263,0.0151613326877,0.0654,0.664775287313,0.0172310343742,0.00652340752111,0.151021230917,0.000675084296134
176,Sabaeus_Monkey,Sooty_Mangabey,0.145777777778,4.53943443997,0.145907896211,0.066,0.671305120845,0.0223863468249,0.095318495779,2.42330903236,0.0701594854823
173,Sabaeus_Monkey,Chimp_ptt,0.0753333333333,2.16712017659,0.0386176029911,0.0662,0.673483596757,0.0230714538082,0.011281657713,0.262436520146,0.00178921087116
18,Western_red_colobus,Chimp_ptt,0.100222222222,2.96285174036,0.0426607585718,0.067,0.682206840064,0.0211142467956,0.0310565361985,0.737192607755,0.003325651766
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182,Tantalus_Monkey,Baboon,0.0417777777778,1.15973736274,0.0154793530203,0.0984,1.03682225634,0.0462904618647,0.0281146073164,0.665339356484,0.0163529125103
55,Colobus_Monkey,Chimp_pts,0.0657777777778,1.87287992084,0.0207139322021,0.0998,1.05320922537,0.0300334157558,0.0213865438731,0.502637845145,0.00146724119147
93,Gorilla,Red-capped_Mangabey,0.139555555556,4.31425260552,0.0780715748372,0.1018,1.07670779596,0.037341601496,0.0103862880532,0.241389441356,0.00154979668993
135,Vervet,Red-capped_Mangabey,0.116222222222,3.49806046162,0.0638654099367,0.1022,1.08142007335,0.0453629795556,0.0131747249936,0.307061798903,0.00199052007712
90,Gorilla,Red-eared_Guenon,0.110888888889,3.31751725497,0.0557962476171,0.1022,1.08142007335,0.0382404985637,0.0121514453825,0.282918787701,0.00181002334722
135,Vervet,Red-capped_Mangabey,0.116222222222,3.49806046162,0.0638654099367,0.1022,1.08142007335,0.0453629795556,0.0131747249936,0.307061798903,0.00199052007712
109,Red-eared_Guenon,Sabaeus_Monkey,0.0793333333333,2.29210403055,0.0440035840386,0.1028,1.08849636776,0.0515751251152,0.0529291378869,1.28540301635,0.012586213552
105,Red-eared_Guenon,Sooty_Mangabey,0.0808888888889,2.3410026539,0.0410726539399,0.1044,1.10741283973,0.0531686206099,0.0661806088514,1.6300277709,0.020831840523
79,Chimp_ptt,Red-capped_Mangabey,0.105555555556,3.13912710991,0.0314556103156,0.1056,1.12164460849,0.0275332870463,0.00521872601688,0.12065806772,0.00039052179031
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153,Red-capped_Mangabey,Chimp_pts,0.895555555556,228.080607221,0.811188709914,0.8148,41.7958686307,0.861436827005,0.142133537989,3.8106964632,0.0524291046491
144,Red-capped_Mangabey,DeBrazzas_Monkey,0.0604444444444,1.71125526489,0.0121154462874,0.9958,2252.35090831,1.00673500473,0.0389613711947,0.932438215671,0.00751514531231
29,Mandrill,Western_red_colobus,0.998888888889,23911.2455939,1.47070537156,0.9974,3644.20562671,1.3795234052,0.397339473011,15.1640992791,0.160178990061
126,Vervet,Baboon,1.0,265999973.54,1.64191256706,1.0,94999990.55,1.18714471746,0.980608851369,1163.1020627,1.10463243863
142,Red-capped_Mangabey,Mandrill,0.927333333333,339.454542127,2.01016078956,1.0,94999990.55,1.98232427783,0.196520849322,5.62550586166,0.117275420308
122,Sooty_Mangabey,Human,1.0,265999973.54,8.91806852284,1.0,94999990.55,7.94894084992,1.0,229999977.121,4.301001528
148,Red-capped_Mangabey,Sooty_Mangabey,0.920444444444,307.757121618,1.06804895326,1.0,94999990.55,1.06273508222,0.187720644666,5.31537822232,0.0907422968482
180,Sabaeus_Monkey,Tantalus_Monkey,0.755777777778,82.3171528547,2.14288077241,1.0,94999990.55,3.47761581917,0.959119979534,539.620651261,2.29966030158
148,Red-capped_Mangabey,Sooty_Mangabey,0.920444444444,307.757121618,1.06804895326,1.0,94999990.55,1.06273508222,0.187720644666,5.31537822232,0.0907422968482
94,Gorilla,Human,1.0,265999973.54,5.86946446444,1.0,94999990.55,4.78655464512,1.0,229999977.121,3.18164797904
142,Red-capped_Mangabey,Mandrill,0.927333333333,339.454542127,2.01016078956,1.0,94999990.55,1.98232427783,0.196520849322,5.62550586166,0.117275420308
126,Vervet,Baboon,1.0,265999973.54,1.64191256706,1.0,94999990.55,1.18714471746,0.980608851369,1163.1020627,1.10463243863
122,Sooty_Mangabey,Human,1.0,265999973.54,8.91806852284,1.0,94999990.55,7.94894084992,1.0,229999977.121,4.301001528
80,Chimp_ptt,Human,1.0,265999973.54,3.64977428925,1.0,94999990.55,2.73437171403,1.0,229999977.121,1.65573474959
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