MAINT: Remove all functionality for AMRFinderPlus#106

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VinzentRisch merged 9 commits intobokulich-lab:mainfrom VinzentRisch:105_remove_amrfinderplus

Oct 4, 2024

+60-1,202

Commits on Sep 27, 2024

Revert "ENH: Add three new parameters to run_amrfinderplus_n (bokulich-lab#97 )"
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Revert "ENH: Removed AMRFinderPlusAnnotation type (bokulich-lab#95 )"
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Revert "ENH: Action to annotate MAGs and contigs with AMRFinderPlus (bokulich-lab#88 )"
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Revert "ENH: Added new action that can download AMRFinderPlus database called fetch_amrfinderplus_db (bokulich-lab#82 )"
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Revert "BUG: added database_format_version.txt to AMRFinderPlusAnnotationsDirFmt (bokulich-lab#92 )"
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Revert "ENH: add AMRFinderPlusAnnotation type (bokulich-lab#86 )"
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Revert "ENH: add new type AMRFinderPlusDatabase (bokulich-lab#81 )"
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Commits on Sep 30, 2024

change rgi to RGI in readme
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Commits on Oct 2, 2024

Merge branch 'main' into 105_remove_amrfinderplus
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