updates to the google sheet and the converter #88
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: test generating other formats | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
jobs: | |
test: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout this repository | |
uses: actions/checkout@v3 | |
- name: Set up Python | |
uses: actions/setup-python@v4 | |
with: | |
python-version: 3.9 | |
- name: Install the required python packages | |
run: python -m pip install .[test] | |
- name: Other installations | |
run: | | |
sudo apt-get update | |
sudo apt-get install -y build-essential git wget curl | |
- name: Generate other model representations | |
run: | | |
cd linkml-schema | |
for file in *.yaml; do | |
if [ "$file" != "bican_biolink.yaml" ]; then | |
name=`basename ${file} .yaml`; | |
echo "Processing $name file.."; | |
# generating json schema | |
gen-json-schema ${file}; | |
# generating jsonld context | |
gen-jsonld-context ${file}; | |
# generating pydantic schema | |
gen-pydantic --pydantic-version 2 ${file}; | |
if [ ${name} != "library_generation" ] && [ ${name} != "genome_annotation" ]; then | |
gen-erdiagram ${file}; | |
fi | |
fi | |
done | |
cd .. | |