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bruAristimunha committed Oct 14, 2024
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4 changes: 2 additions & 2 deletions dev/.buildinfo
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@@ -1,4 +1,4 @@
# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: c9b971a4cef27419dda75b6ab29173ec
# This file records the configuration used when building these files. When it is not found, a full rebuild will be done.
config: 6df527d28a47201273662a728cbf7986
tags: 645f666f9bcd5a90fca523b33c5a78b7
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15 changes: 2 additions & 13 deletions dev/_static/basic.css
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@@ -1,12 +1,5 @@
/*
* basic.css
* ~~~~~~~~~
*
* Sphinx stylesheet -- basic theme.
*
* :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS.
* :license: BSD, see LICENSE for details.
*
*/

/* -- main layout ----------------------------------------------------------- */
Expand Down Expand Up @@ -115,15 +108,11 @@ img {
/* -- search page ----------------------------------------------------------- */

ul.search {
margin: 10px 0 0 20px;
padding: 0;
margin-top: 10px;
}

ul.search li {
padding: 5px 0 5px 20px;
background-image: url(file.png);
background-repeat: no-repeat;
background-position: 0 7px;
padding: 5px 0;
}

ul.search li a {
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7 changes: 0 additions & 7 deletions dev/_static/doctools.js
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@@ -1,12 +1,5 @@
/*
* doctools.js
* ~~~~~~~~~~~
*
* Base JavaScript utilities for all Sphinx HTML documentation.
*
* :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS.
* :license: BSD, see LICENSE for details.
*
*/
"use strict";

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7 changes: 0 additions & 7 deletions dev/_static/language_data.js
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@@ -1,13 +1,6 @@
/*
* language_data.js
* ~~~~~~~~~~~~~~~~
*
* This script contains the language-specific data used by searchtools.js,
* namely the list of stopwords, stemmer, scorer and splitter.
*
* :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS.
* :license: BSD, see LICENSE for details.
*
*/

var stopwords = ["a", "and", "are", "as", "at", "be", "but", "by", "for", "if", "in", "into", "is", "it", "near", "no", "not", "of", "on", "or", "such", "that", "the", "their", "then", "there", "these", "they", "this", "to", "was", "will", "with"];
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38 changes: 25 additions & 13 deletions dev/_static/searchtools.js
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@@ -1,12 +1,5 @@
/*
* searchtools.js
* ~~~~~~~~~~~~~~~~
*
* Sphinx JavaScript utilities for the full-text search.
*
* :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS.
* :license: BSD, see LICENSE for details.
*
*/
"use strict";

Expand All @@ -20,7 +13,7 @@ if (typeof Scorer === "undefined") {
// and returns the new score.
/*
score: result => {
const [docname, title, anchor, descr, score, filename] = result
const [docname, title, anchor, descr, score, filename, kind] = result
return score
},
*/
Expand All @@ -47,6 +40,14 @@ if (typeof Scorer === "undefined") {
};
}

// Global search result kind enum, used by themes to style search results.
class SearchResultKind {
static get index() { return "index"; }
static get object() { return "object"; }
static get text() { return "text"; }
static get title() { return "title"; }
}

const _removeChildren = (element) => {
while (element && element.lastChild) element.removeChild(element.lastChild);
};
Expand All @@ -64,9 +65,13 @@ const _displayItem = (item, searchTerms, highlightTerms) => {
const showSearchSummary = DOCUMENTATION_OPTIONS.SHOW_SEARCH_SUMMARY;
const contentRoot = document.documentElement.dataset.content_root;

const [docName, title, anchor, descr, score, _filename] = item;
const [docName, title, anchor, descr, score, _filename, kind] = item;

let listItem = document.createElement("li");
// Add a class representing the item's type:
// can be used by a theme's CSS selector for styling
// See SearchResultKind for the class names.
listItem.classList.add(`kind-${kind}`);
let requestUrl;
let linkUrl;
if (docBuilder === "dirhtml") {
Expand Down Expand Up @@ -115,8 +120,10 @@ const _finishSearch = (resultCount) => {
"Your search did not match any documents. Please make sure that all words are spelled correctly and that you've selected enough categories."
);
else
Search.status.innerText = _(
"Search finished, found ${resultCount} page(s) matching the search query."
Search.status.innerText = Documentation.ngettext(
"Search finished, found one page matching the search query.",
"Search finished, found ${resultCount} pages matching the search query.",
resultCount,
).replace('${resultCount}', resultCount);
};
const _displayNextItem = (
Expand All @@ -138,7 +145,7 @@ const _displayNextItem = (
else _finishSearch(resultCount);
};
// Helper function used by query() to order search results.
// Each input is an array of [docname, title, anchor, descr, score, filename].
// Each input is an array of [docname, title, anchor, descr, score, filename, kind].
// Order the results by score (in opposite order of appearance, since the
// `_displayNextItem` function uses pop() to retrieve items) and then alphabetically.
const _orderResultsByScoreThenName = (a, b) => {
Expand Down Expand Up @@ -248,6 +255,7 @@ const Search = {
searchSummary.classList.add("search-summary");
searchSummary.innerText = "";
const searchList = document.createElement("ul");
searchList.setAttribute("role", "list");
searchList.classList.add("search");

const out = document.getElementById("search-results");
Expand Down Expand Up @@ -318,7 +326,7 @@ const Search = {
const indexEntries = Search._index.indexentries;

// Collect multiple result groups to be sorted separately and then ordered.
// Each is an array of [docname, title, anchor, descr, score, filename].
// Each is an array of [docname, title, anchor, descr, score, filename, kind].
const normalResults = [];
const nonMainIndexResults = [];

Expand All @@ -337,6 +345,7 @@ const Search = {
null,
score + boost,
filenames[file],
SearchResultKind.title,
]);
}
}
Expand All @@ -354,6 +363,7 @@ const Search = {
null,
score,
filenames[file],
SearchResultKind.index,
];
if (isMain) {
normalResults.push(result);
Expand Down Expand Up @@ -475,6 +485,7 @@ const Search = {
descr,
score,
filenames[match[0]],
SearchResultKind.object,
]);
};
Object.keys(objects).forEach((prefix) =>
Expand Down Expand Up @@ -585,6 +596,7 @@ const Search = {
null,
score,
filenames[file],
SearchResultKind.text,
]);
}
return results;
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2 changes: 1 addition & 1 deletion dev/api.html
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<script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>

<script src="_static/documentation_options.js?v=cc929139"></script>
<script src="_static/doctools.js?v=9a2dae69"></script>
<script src="_static/doctools.js?v=9bcbadda"></script>
<script src="_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="_static/design-tabs.js?v=f930bc37"></script>
<script async="async" src="https://www.googletagmanager.com/gtag/js?id=G-7Q43R82K6D"></script>
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2 changes: 1 addition & 1 deletion dev/auto_examples/advanced_training/index.html
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<script src="../../_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>

<script src="../../_static/documentation_options.js?v=cc929139"></script>
<script src="../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../_static/design-tabs.js?v=f930bc37"></script>
<script async="async" src="https://www.googletagmanager.com/gtag/js?id=G-7Q43R82K6D"></script>
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Expand Up @@ -42,7 +42,7 @@
<script src="../../_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>

<script src="../../_static/documentation_options.js?v=cc929139"></script>
<script src="../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../_static/design-tabs.js?v=f930bc37"></script>
<script async="async" src="https://www.googletagmanager.com/gtag/js?id=G-7Q43R82K6D"></script>
Expand Down Expand Up @@ -605,7 +605,7 @@ <h3>Preprocessing<a class="headerlink" href="#preprocessing" title="Link to this
<a href="../../generated/braindecode.preprocessing.preprocess.html#braindecode.preprocessing.preprocess" title="braindecode.preprocessing.preprocess" class="sphx-glr-backref-module-braindecode-preprocessing sphx-glr-backref-type-py-function"><span class="n">preprocess</span></a><span class="p">(</span><a href="../../generated/braindecode.datasets.BaseConcatDataset.html#braindecode.datasets.BaseConcatDataset" title="braindecode.datasets.BaseConcatDataset" class="sphx-glr-backref-module-braindecode-datasets sphx-glr-backref-type-py-class sphx-glr-backref-instance"><span class="n">test_set</span></a><span class="p">,</span> <span class="p">[</span><a href="../../generated/braindecode.preprocessing.Preprocessor.html#braindecode.preprocessing.Preprocessor" title="braindecode.preprocessing.Preprocessor" class="sphx-glr-backref-module-braindecode-preprocessing sphx-glr-backref-type-py-class"><span class="n">Preprocessor</span></a><span class="p">(</span><span class="s2">&quot;crop&quot;</span><span class="p">,</span> <span class="n">tmin</span><span class="o">=</span><span class="mi">0</span><span class="p">,</span> <span class="n">tmax</span><span class="o">=</span><span class="mi">24</span><span class="p">)],</span> <span class="n">n_jobs</span><span class="o">=-</span><span class="mi">1</span><span class="p">)</span>
</pre></div>
</div>
<div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span>&lt;braindecode.datasets.base.BaseConcatDataset object at 0x7fc924635060&gt;
<div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span>&lt;braindecode.datasets.base.BaseConcatDataset object at 0x7f9de52995a0&gt;
</pre></div>
</div>
<p>In time series targets setup, targets variables are stored in mne.Raw object as channels
Expand Down Expand Up @@ -842,14 +842,14 @@ <h2>Training<a class="headerlink" href="#training" title="Link to this heading">
</div>
<div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span> epoch r2_train r2_valid train_loss valid_loss lr dur
------- ---------- ---------- ------------ ------------ ------ ------
1 -23.7826 -4.6087 1.8225 11.7419 0.0006 0.5480
2 -1.1990 -0.1716 1.5134 2.6475 0.0006 0.4601
3 -0.3654 -0.4985 1.2625 3.4645 0.0005 0.4696
4 -0.4383 -0.2731 1.2058 2.9438 0.0004 0.4527
5 -0.5982 -0.1512 1.1027 2.6529 0.0002 0.4511
6 -0.6090 -0.1255 1.1121 2.5886 0.0001 0.4694
7 -0.4455 -0.1445 0.9618 2.6339 0.0000 0.4500
8 -0.2790 -0.1755 1.0927 2.7063 0.0000 0.4804
1 -23.7826 -4.6087 1.8225 11.7419 0.0006 0.5052
2 -1.1990 -0.1716 1.5134 2.6475 0.0006 0.4639
3 -0.3654 -0.4985 1.2625 3.4645 0.0005 0.4692
4 -0.4383 -0.2731 1.2058 2.9438 0.0004 0.4563
5 -0.5982 -0.1512 1.1027 2.6529 0.0002 0.4551
6 -0.6090 -0.1255 1.1121 2.5886 0.0001 0.4492
7 -0.4455 -0.1445 0.9618 2.6339 0.0000 0.4615
8 -0.2790 -0.1755 1.0927 2.7063 0.0000 0.4491
</pre></div>
</div>
<p>Obtaining predictions and targets for the test, train, and validation dataset</p>
Expand Down Expand Up @@ -970,8 +970,8 @@ <h2>Plot Results<a class="headerlink" href="#plot-results" title="Link to this h
<a href="https://matplotlib.org/stable/api/_as_gen/matplotlib.pyplot.tight_layout.html#matplotlib.pyplot.tight_layout" title="matplotlib.pyplot.tight_layout" class="sphx-glr-backref-module-matplotlib-pyplot sphx-glr-backref-type-py-function"><span class="n">plt</span><span class="o">.</span><span class="n">tight_layout</span></a><span class="p">()</span>
</pre></div>
</div>
<img src="../../_images/sphx_glr_plot_bcic_iv_4_ecog_cropped_002.png" srcset="../../_images/sphx_glr_plot_bcic_iv_4_ecog_cropped_002.png" alt="plot bcic iv 4 ecog cropped" class = "sphx-glr-single-img"/><p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (2 minutes 17.928 seconds)</p>
<p><strong>Estimated memory usage:</strong> 1446 MB</p>
<img src="../../_images/sphx_glr_plot_bcic_iv_4_ecog_cropped_002.png" srcset="../../_images/sphx_glr_plot_bcic_iv_4_ecog_cropped_002.png" alt="plot bcic iv 4 ecog cropped" class = "sphx-glr-single-img"/><p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (1 minutes 25.993 seconds)</p>
<p><strong>Estimated memory usage:</strong> 1600 MB</p>
<div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-advanced-training-plot-bcic-iv-4-ecog-cropped-py">
<div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
<p><a class="reference download internal" download="" href="../../_downloads/10fc813a8f78253f4bf301264950f5c1/plot_bcic_iv_4_ecog_cropped.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">plot_bcic_iv_4_ecog_cropped.ipynb</span></code></a></p>
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16 changes: 8 additions & 8 deletions dev/auto_examples/advanced_training/plot_data_augmentation.html
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Expand Up @@ -42,7 +42,7 @@
<script src="../../_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>

<script src="../../_static/documentation_options.js?v=cc929139"></script>
<script src="../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../_static/design-tabs.js?v=f930bc37"></script>
<script async="async" src="https://www.googletagmanager.com/gtag/js?id=G-7Q43R82K6D"></script>
Expand Down Expand Up @@ -599,7 +599,7 @@ <h3><a class="toc-backref" href="#id3" role="doc-backlink">Preprocessing</a><a c
<div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span>/home/runner/work/braindecode/braindecode/braindecode/preprocessing/preprocess.py:69: UserWarning: Preprocessing choices with lambda functions cannot be saved.
warn(&quot;Preprocessing choices with lambda functions cannot be saved.&quot;)

&lt;braindecode.datasets.moabb.MOABBDataset object at 0x7fc92f129210&gt;
&lt;braindecode.datasets.moabb.MOABBDataset object at 0x7f9de202f550&gt;
</pre></div>
</div>
</section>
Expand Down Expand Up @@ -793,10 +793,10 @@ <h3><a class="toc-backref" href="#id10" role="doc-backlink">Create an EEGClassif
</div>
<div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span> epoch train_accuracy train_loss valid_acc valid_accuracy valid_loss lr dur
------- ---------------- ------------ ----------- ---------------- ------------ ------ ------
1 0.2639 1.4655 0.2639 0.2639 1.5266 0.0006 1.8168
2 0.3299 1.3119 0.3194 0.3194 1.3948 0.0005 1.6408
3 0.4757 1.1941 0.2986 0.2986 1.3259 0.0002 1.6393
4 0.5625 1.1671 0.3333 0.3333 1.3025 0.0000 1.6244
1 0.2639 1.4655 0.2639 0.2639 1.5266 0.0006 1.7808
2 0.3299 1.3119 0.3194 0.3194 1.3948 0.0005 1.6071
3 0.4757 1.1941 0.2986 0.2986 1.3259 0.0002 1.5875
4 0.5625 1.1671 0.3333 0.3333 1.3025 0.0000 1.5972

&lt;class &#39;braindecode.classifier.EEGClassifier&#39;&gt;[initialized](
module_=============================================================================================================================================
Expand Down Expand Up @@ -850,8 +850,8 @@ <h3><a class="toc-backref" href="#id12" role="doc-backlink">Setting the data aug
<div class="highlight-Python notranslate"><div class="highlight"><pre><span></span><a href="../../generated/braindecode.datasets.BaseConcatDataset.html#braindecode.datasets.BaseConcatDataset" title="braindecode.datasets.BaseConcatDataset" class="sphx-glr-backref-module-braindecode-datasets sphx-glr-backref-type-py-class sphx-glr-backref-instance"><span class="n">train_set</span></a><span class="o">.</span><a href="../../generated/braindecode.augmentation.FrequencyShift.html#braindecode.augmentation.FrequencyShift" title="braindecode.augmentation.FrequencyShift" class="sphx-glr-backref-module-braindecode-augmentation sphx-glr-backref-type-py-class sphx-glr-backref-instance"><span class="n">transform</span></a> <span class="o">=</span> <a href="../../generated/braindecode.augmentation.Compose.html#braindecode.augmentation.Compose" title="braindecode.augmentation.Compose" class="sphx-glr-backref-module-braindecode-augmentation sphx-glr-backref-type-py-class sphx-glr-backref-instance"><span class="n">composed_transforms</span></a>
</pre></div>
</div>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 18.648 seconds)</p>
<p><strong>Estimated memory usage:</strong> 680 MB</p>
<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 17.206 seconds)</p>
<p><strong>Estimated memory usage:</strong> 1328 MB</p>
<div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-advanced-training-plot-data-augmentation-py">
<div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
<p><a class="reference download internal" download="" href="../../_downloads/1d879df548fa18be8c23d9ca0dc008d4/plot_data_augmentation.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">plot_data_augmentation.ipynb</span></code></a></p>
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