Changing the gazelle configuration to properly accept overrides

BUILD.bazel

@@ -4,16 +4,6 @@ load("@rules_go//go:def.bzl", "go_binary", "go_library")
 # gazelle:prefix github.com/buildkite/agent/v3
 gazelle(name = "gazelle")
 
-gazelle(
-    name = "gazelle-update-repos",
-    args = [
-        "-from_file=go.mod",
-        "-to_macro=deps.bzl%go_dependencies",
-        "-prune",
-    ],
-    command = "update-repos",
-)
-
 go_binary(
     name = "agent",
     embed = [":agent_lib"],

MODULE.bazel

@@ -7,5 +7,12 @@ go_sdk.download(version = "1.22.7")
 go_deps = use_extension("@gazelle//:extensions.bzl", "go_deps")
 go_deps.from_file(go_mod = "//:go.mod")
 
+go_deps.gazelle_override(
+    directives = [
+        "gazelle:go_generate_proto false",
+    ],
+    path = "github.com/DataDog/sketches-go",
+)
+
 # All *direct* dependencies are required to be listed explicitly
 use_repo(go_deps, "com_github_aws_aws_sdk_go", "com_github_aws_aws_sdk_go_v2", "com_github_aws_aws_sdk_go_v2_config", "com_github_aws_aws_sdk_go_v2_feature_ec2_imds", "com_github_aws_aws_sdk_go_v2_service_kms", "com_github_azure_azure_sdk_for_go_sdk_azidentity", "com_github_azure_azure_sdk_for_go_sdk_storage_azblob", "com_github_brunoscheufler_aws_ecs_metadata_go", "com_github_buildkite_bintest_v3", "com_github_buildkite_go_pipeline", "com_github_buildkite_interpolate", "com_github_buildkite_roko", "com_github_buildkite_shellwords", "com_github_creack_pty", "com_github_datadog_datadog_go_v5", "com_github_denisbrodbeck_machineid", "com_github_dustin_go_humanize", "com_github_dustinkirkland_golang_petname", "com_github_gliderlabs_ssh", "com_github_go_chi_chi_v5", "com_github_gofrs_flock", "com_github_google_go_cmp", "com_github_google_go_querystring", "com_github_gowebpki_jcs", "com_github_khan_genqlient", "com_github_lestrrat_go_jwx_v2", "com_github_mattn_go_zglob", "com_github_oleiade_reflections", "com_github_opentracing_opentracing_go", "com_github_pborman_uuid", "com_github_puzpuzpuz_xsync_v2", "com_github_qri_io_jsonschema", "com_github_stretchr_testify", "com_github_urfave_cli", "com_google_cloud_go_compute_metadata", "dev_drjosh_zzglob", "in_gopkg_datadog_dd_trace_go_v1", "in_gopkg_yaml_v3", "io_opentelemetry_go_contrib_propagators_aws", "io_opentelemetry_go_contrib_propagators_b3", "io_opentelemetry_go_contrib_propagators_jaeger", "io_opentelemetry_go_contrib_propagators_ot", "io_opentelemetry_go_otel", "io_opentelemetry_go_otel_exporters_otlp_otlptrace", "io_opentelemetry_go_otel_exporters_otlp_otlptrace_otlptracegrpc", "io_opentelemetry_go_otel_sdk", "io_opentelemetry_go_otel_trace", "org_golang_google_api", "org_golang_x_crypto", "org_golang_x_exp", "org_golang_x_net", "org_golang_x_oauth2", "org_golang_x_sys", "org_golang_x_term", "tools_gotest_v3")