Skip to content

This is used to call Codeml to calculate the positive selection of gene in Branch-Sites Model.(Require codon sequence)

License

Notifications You must be signed in to change notification settings

byemaxx/callCodeml

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

8 Commits
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

callCodeml

This is used to call Codeml to calculate the positive selection of gene in Branch-Sites Model.(Require codon sequence) callCodeml automatically calculates thousands of candidate genes and looks for PSGs.

Usage: python3 callCodeml.py seqDir treeFile

Result Table

About

This is used to call Codeml to calculate the positive selection of gene in Branch-Sites Model.(Require codon sequence)

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages