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params_basset.json
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params_basset.json
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{
"train": {
"batch_size": 64,
"shuffle_buffer": 8192,
"optimizer": "sgd",
"loss": "bce",
"learning_rate": 0.005,
"momentum": 0.98,
"patience": 12,
"train_epochs_min": 10
},
"model": {
"seq_length": 1344,
"augment_rc": true,
"augment_shift": 3,
"activation": "gelu",
"norm_type": "batch",
"bn_momentum": 0.90,
"trunk": [
{
"name": "conv_dna",
"filters": 288,
"kernel_size": 17,
"pool_size": 3
},
{
"name": "conv_tower",
"filters_init": 288,
"filters_end": 512,
"divisible_by": 16,
"kernel_size": 5,
"pool_size": 2,
"repeat": 6
},
{
"name": "conv_block",
"filters": 256,
"kernel_size": 1
},
{
"name": "dense_block",
"flatten": true,
"units": 768,
"dropout": 0.2
}
],
"head": [
{
"name": "final",
"units": 164,
"activation": "sigmoid"
}
]
}
}