v1.0.3 - for QuPath 0.5.+

This will be the last release tested to be compatible with QuPath 0.5.+

What's Changed

Features

• classifier_sample_images.groovy script added to sample some images to create a randomly dataset of sections from multiple projects. This may be useful to perform the labelling needed to create a classifier.
• enhanced AtlasManager:
  • AtlasManager.saveResults() now throws an error if the atlas hierarchy contains regions classified as "Exclude"
  • add AtlasManager.isSplit()
  • add AtlasManager.fixExclusions()
  • add checks on the atlas hierarchy before many operations are performed

Fixes

• docs fixups
• fix a bug with ImageChannelTools.getChannelStats()
• fix overlapping classes not being added to QuPath GUI

Full Changelog: v1.0.2...v1.0.3

v1.0.2 - for QuPath 0.5.+

Version v1.0.2

Enhancements

• ChannelDetections config now supports applying a PartialClassifier (name: "ALL") that resets any previous applied classification.
• BoundingBox.contains() method added.
• if a new detection container is added and it intersects with any previous ones, it updates the old detection with the new ones.
• documentation update

Bugs fixed

• fixed a bug where ChannelDetection constructor would fail when no prior containers was found.

v1.0.1- for QuPath 0.5.+

this is a minor release to fix a bug where AtlasManager.saveResults() would export the number of detection to be NaN if no detection was found in the whole image.

v1.0.0 - Let BraiAn out!

version 1.0.0