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  1. JuliaPhylo/PhyloNetworks.jl JuliaPhylo/PhyloNetworks.jl Public

    PhyloNetworks: a julia package with utilities for phylogenetic networks

    Julia 158 49

  2. khabbazian/l1ou khabbazian/l1ou Public

    Detection of evolutionary shifts in Ornstein-Uhlenbeck models

    R 19 7

  3. lamho86/phylolm lamho86/phylolm Public

    R 32 13

  4. JuliaPhylo/PhyloCoalSimulations.jl JuliaPhylo/PhyloCoalSimulations.jl Public

    Julia 13 2

  5. manipulations of trees and networks:... manipulations of trees and networks: outgroup rerooting, and identification of outgroup (on phylogenies that might be missing some species)
    1
    #=
    2
    to use the functions in this file, read it within julia with:
    3
    include("path/to/outgroup-reroot.jl");
    4
    but replace 'path/to/' by the actual path to this file on your machine.
    5
    main function defined in this file:
  6. networkPCM-workshop networkPCM-workshop Public

    workshop on phylogenetic comparative methods on networks, July 2023

    CSS 3