GitHub - cestes-19/RVC: Florida Keys Reef Fish Biodiversity through time

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Florida Keys Reef Fish Biodiversity through time

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Name		Name	Last commit message	Last commit date
Latest commit History 537 Commits
90srvc		90srvc
FKNMS_sample_grid		FKNMS_sample_grid
Final_UnifiedReefMap_Version2.0		Final_UnifiedReefMap_Version2.0
SDG14		SDG14
Scripts		Scripts
data		data
docs		docs
functional_diversity		functional_diversity
plots		plots
rsconnect		rsconnect
.DS_Store		.DS_Store
.Rapp.history		.Rapp.history
.gitignore		.gitignore
DunnTest_all_strata.csv		DunnTest_all_strata.csv
DunnTest_all_subregion.csv		DunnTest_all_subregion.csv
RVC.Rproj		RVC.Rproj
RVC_Codes.xlsb		RVC_Codes.xlsb
RVC_diversity_analysis.Rmd		RVC_diversity_analysis.Rmd
abun_model_summary_rds		abun_model_summary_rds
abun_prop.deviance_rds		abun_prop.deviance_rds
bio_model_summary_rds		bio_model_summary_rds
bio_prop.deviance_rds		bio_prop.deviance_rds
even_model_summary_rds		even_model_summary_rds
even_prop.deviance_rds		even_prop.deviance_rds
fd_eveness_rds		fd_eveness_rds
fk.shp.fortify_rds		fk.shp.fortify_rds
func_model_summary_rds		func_model_summary_rds
func_prop.deviance_rds		func_prop.deviance_rds
htmlwidget_abunpie.html		htmlwidget_abunpie.html
htmlwidget_save 2.html		htmlwidget_save 2.html
htmlwidget_save.Rmd		htmlwidget_save.Rmd
htmlwidget_save.html		htmlwidget_save.html
htmlwidget_treemap2.html		htmlwidget_treemap2.html
htmlwidget_treemap2.png		htmlwidget_treemap2.png
lion fish_abundance.pdf		lion fish_abundance.pdf
map_regions.Rmd		map_regions.Rmd
map_regions.html		map_regions.html
matrices_ntmr.csv		matrices_ntmr.csv
matrices_ntmr_rds		matrices_ntmr_rds
matrices_strat_and_year_grouped.csv		matrices_strat_and_year_grouped.csv
matrices_strat_and_year_grouped_with_subregion_rds		matrices_strat_and_year_grouped_with_subregion_rds
matrices_strat_grouped_rds		matrices_strat_grouped_rds
matrices_strat_grouped_with_subregion_rds		matrices_strat_grouped_with_subregion_rds
matrices_strat_year_subregion_rds		matrices_strat_year_subregion_rds
matrices_year_subregion.csv		matrices_year_subregion.csv
matrices_year_subregion_rds		matrices_year_subregion_rds
mean_indices.csv		mean_indices.csv
partial_deviance_list.csv		partial_deviance_list.csv
pp_example.Rmd		pp_example.Rmd
psu_abun_sum_rds		psu_abun_sum_rds
psu_bio_sum_rds		psu_bio_sum_rds
psu_common.csv		psu_common.csv
psu_div_forPlot.csv		psu_div_forPlot.csv
psu_div_rds		psu_div_rds
psu_family_group.csv		psu_family_group.csv
psu_fk_div_rds		psu_fk_div_rds
psu_matrices_data_rds		psu_matrices_data_rds
psu_matrices_data_with_subregion_rds		psu_matrices_data_with_subregion_rds
psu_metrics_coord_rds		psu_metrics_coord_rds
psu_sciname.csv		psu_sciname.csv
raoQ_list.csv		raoQ_list.csv
richness_model_summary_rds		richness_model_summary_rds
richness_prop.deviance_rds		richness_prop.deviance_rds
sample_data_rds		sample_data_rds
shan_model_summary_rds		shan_model_summary_rds
shan_prop.deviance_rds		shan_prop.deviance_rds
simp_model_summary_rds		simp_model_summary_rds
simp_prop.deviance_rds		simp_prop.deviance_rds
spp_list.csv		spp_list.csv
stats_all_matrices_data.csv		stats_all_matrices_data.csv
stats_all_matrices_data_rds		stats_all_matrices_data_rds
strata_abun_all.csv		strata_abun_all.csv
strata_diversity_weighted		strata_diversity_weighted
strata_numbered.csv		strata_numbered.csv
strata_summary.csv		strata_summary.csv
subregions_rds		subregions_rds
thesis_plots.Rmd		thesis_plots.Rmd