Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[R] Remove tiledb dependency for R package #1274

Open
2 tasks
ivirshup opened this issue Sep 5, 2024 · 1 comment
Open
2 tasks

[R] Remove tiledb dependency for R package #1274

ivirshup opened this issue Sep 5, 2024 · 1 comment

Comments

@ivirshup
Copy link
Collaborator

ivirshup commented Sep 5, 2024

Motivation

My understanding is that tiledbsoma no longer relies on the tiledb package so that we need to deal with conflicting versions less. However, the cellxgene_census package still has a hard dependency on tiledb.

Definition of Done

Remove the tiledb dep

Tasks

Detail the specific tasks that can be used to accomplish the desired changes.
If detailed steps cannot be provided at this time, please file a Tech Proposal instead.

  • Remove tiledb dep
  • Don't break things

@mlin or @johnkerl we expect this to just be removing the dependency, right?

@johnkerl
Copy link

johnkerl commented Sep 5, 2024

My understanding is that tiledbsoma no longer relies on the tiledb package so that we need to deal with conflicting versions less. However, the cellxgene_census package still has a hard dependency on tiledb.

@ivirshup this is still a work in progress for R. For Python, it's largely complete.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

2 participants