Merge pull request #122 from jabbate/master

more file name and date changes for SL Nov data
cmrivers · Nov 23, 2014 · 86cac21 · 86cac21
2 parents f4d7fed + 43ed4cb
commit 86cac21
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Showing 38 changed files with 354 additions and 251 deletions.
diff --git a/sl_data/2014-10-12-v139.csv b/sl_data/2014-10-12-v139.csv
diff --git a/sl_data/2014-10-13-v139.csv b/sl_data/2014-10-13-v139.csv
@@ -0,0 +1,30 @@
+date,variable,Kailahun,Kenema,Kono,Kambia,Koinadugu,Bombali,Tonkolili,Port Loko,Pujehun,Bo,Moyamba,Bonthe,Western area urban,Western area rural,National,Western area
+2014-10-13,population,465048,653013,325003,341690,335471,494139,434937,557978,335574,654142,278119,168729,,,6348350,1304507
+2014-10-13,new_noncase,0,3,0,0,0,0,0,1,0,4,0,0,,,28,20
+2014-10-13,new_suspected,0,0,0,0,0,0,1,0,0,0,0,0,,,2,1
+2014-10-13,new_probable,0,0,0,0,0,0,0,0,0,0,0,0,,,0,0
+2014-10-13,new_confirmed,1,7,0,0,0,0,2,0,0,2,0,0,,,45,33
+2014-10-13,cum_noncase,284,688,67,10,31,206,60,149,6,127,57,1,,,2507,821
+2014-10-13,cum_suspected,18,48,52,3,0,57,24,20,3,34,22,2,,,365,82
+2014-10-13,cum_probable,32,0,1,0,0,1,0,1,0,1,0,0,,,37,1
+2014-10-13,cum_confirmed,536,454,31,25,0,388,129,405,24,127,77,1,,,2894,697
+2014-10-13,death_suspected,4,4,2,6,0,18,3,49,3,2,6,1,,,106,8
+2014-10-13,death_probable,35,0,19,9,0,11,17,1,2,43,19,1,,,161,4
+2014-10-13,death_confirmed,219,238,18,9,0,123,34,57,12,53,29,1,,,931,138
+2014-10-13,cfr,41,53,59,36,0,32,26,14,50,42,38,100,,,33,41
+2014-10-13,etc_new_admission,,,,,,,,,,3,,,,,4,
+2014-10-13,etc_currently_admitted,53,,,,,,,,,22,,,,,171,
+2014-10-13,etc_cum_admission,504,,,,,,,,,62,,,,,1705,
+2014-10-13,etc_new_deaths,,,,,,,,,,0,,,,,0,
+2014-10-13,etc_cum_deaths,238,,,,,,,,,20,,,,,625,
+2014-10-13,etc_new_discharges,,,,,,,,,,6,,,,,8,
+2014-10-13,etc_cum_discharges,172,,,,,,,,,22,,,,,571,
+2014-10-13,cum_contacts,2037,2945,524,412,,2077,2022,3826,949,967,765,105,1975,1563,20167,
+2014-10-13,cum_completed_contacts,1653,2641,191,138,,471,680,568,469,661,464,90,1018,825,9869,
+2014-10-13,contacts_followed,384,304,333,274,,1606,1342,3258,380,306,301,15,957,738,10198,
+2014-10-13,new_contacts,7,43,1,0,,12,82,250,270,80,114,0,42,275,1176,
+2014-10-13,contacts_healthy,382,298,325,274,,1599,1342,3244,380,298,301,15,874,441,9773,
+2014-10-13,contacts_ill,2,6,8,0,,6,0,4,0,0,0,0,0,1,27,
+2014-10-13,contacts_not_seen,0,0,0,0,,1,0,10,0,8,0,0,83,297,399,
+2014-10-13,new_completed_contacts,75,9,0,52,,14,89,40,135,0,0,0,52,128,594,
+2014-10-13,percent_seen,100%,99%,98%,100%,,98%,100%,98%,100%,100%,100%,100%,98%,98%,98%,
diff --git a/sl_data/2014-10-15-v140.csv → sl_data/2014-10-14-v140.csv b/sl_data/2014-10-15-v140.csv → sl_data/2014-10-14-v140.csv
diff --git a/sl_data/2014-10-17-v142.csv → sl_data/2014-10-16-v142.csv b/sl_data/2014-10-17-v142.csv → sl_data/2014-10-16-v142.csv
diff --git a/sl_data/2014-10-18-v143.csv → sl_data/2014-10-17-v143.csv b/sl_data/2014-10-18-v143.csv → sl_data/2014-10-17-v143.csv
diff --git a/sl_data/2014-10-19-v144.csv → sl_data/2014-10-18-v144.csv b/sl_data/2014-10-19-v144.csv → sl_data/2014-10-18-v144.csv
diff --git a/sl_data/2014-10-20-v145.csv → sl_data/2014-10-19-v145.csv b/sl_data/2014-10-20-v145.csv → sl_data/2014-10-19-v145.csv
diff --git a/sl_data/2014-10-21-v146.csv → sl_data/2014-10-20-v146.csv b/sl_data/2014-10-21-v146.csv → sl_data/2014-10-20-v146.csv
diff --git a/sl_data/2014-10-22-v147.csv → sl_data/2014-10-21-v147.csv b/sl_data/2014-10-22-v147.csv → sl_data/2014-10-21-v147.csv
diff --git a/sl_data/2014-10-23-v148.csv → sl_data/2014-10-22-v148.csv b/sl_data/2014-10-23-v148.csv → sl_data/2014-10-22-v148.csv
diff --git a/sl_data/2014-10-24-v149.csv → sl_data/2014-10-23-v149.csv b/sl_data/2014-10-24-v149.csv → sl_data/2014-10-23-v149.csv
diff --git a/sl_data/2014-10-25-v150.csv → sl_data/2014-10-24-v150.csv b/sl_data/2014-10-25-v150.csv → sl_data/2014-10-24-v150.csv
diff --git a/sl_data/2014-10-26-v151.csv → sl_data/2014-10-25-v151.csv b/sl_data/2014-10-26-v151.csv → sl_data/2014-10-25-v151.csv
diff --git a/sl_data/2014-10-27-v152.csv → sl_data/2014-10-26-v152.csv b/sl_data/2014-10-27-v152.csv → sl_data/2014-10-26-v152.csv
diff --git a/sl_data/2014-10-28-v153.csv → sl_data/2014-10-27-v153.csv b/sl_data/2014-10-28-v153.csv → sl_data/2014-10-27-v153.csv
diff --git a/sl_data/2014-10-29-v154.csv → sl_data/2014-10-28-v154.csv b/sl_data/2014-10-29-v154.csv → sl_data/2014-10-28-v154.csv
diff --git a/sl_data/2014-10-31-v156.csv → sl_data/2014-10-30-v156.csv b/sl_data/2014-10-31-v156.csv → sl_data/2014-10-30-v156.csv
diff --git a/sl_data/2014-11-01-v157.csv → sl_data/2014-10-31-v157.csv b/sl_data/2014-11-01-v157.csv → sl_data/2014-10-31-v157.csv
diff --git a/sl_data/2014-11-02-v158.csv → sl_data/2014-11-01-v158.csv b/sl_data/2014-11-02-v158.csv → sl_data/2014-11-01-v158.csv
diff --git a/sl_data/2014-11-03-v159.csv → sl_data/2014-11-02-v159.csv b/sl_data/2014-11-03-v159.csv → sl_data/2014-11-02-v159.csv
diff --git a/sl_data/2014-11-07-v164.csv b/sl_data/2014-11-07-v164.csv
@@ -0,0 +1,38 @@
+date,variable,Kailahun,Kenema,Kono,Kambia,Koinadugu,Bombali,Tonkolili,Port Loko,Pujehun,Bo,Moyamba,Bonthe,Western area urban,Western area rural,National
+2014-11-07,population,465048,653013,325003,341690,335471,494139,434937,557978,335574,654142,278119,168729,1040888,263619,6348350
+2014-11-07,new_noncase,0,11,2,0,0,13,0,2,0,16,2,1,33,8,88
+2014-11-07,new_suspected,0,0,0,0,1,2,0,0,0,2,1,0,6,0,12
+2014-11-07,new_probable,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
+2014-11-07,new_confirmed,2,0,0,0,4,6,0,2,0,4,3,0,12,12,45
+2014-11-07,cum_noncase,312,891,93,30,50,409,126,275,13,262,95,4,957,478,3995
+2014-11-07,cum_suspected,18,98,61,10,14,87,41,59,10,77,34,3,100,51,663
+2014-11-07,cum_probable,32,0,1,0,32,6,4,1,0,1,1,0,1,0,79
+2014-11-07,cum_confirmed,557,493,42,50,48,638,241,567,28,188,121,2,727,575,4277
+2014-11-07,death_suspected,4,4,2,6,0,22,4,74,3,8,9,1,8,12,157
+2014-11-07,death_probable,35,0,19,9,32,19,21,1,2,43,20,1,4,2,208
+2014-11-07,death_confirmed,228,257,18,13,13,151,55,89,16,61,34,1,100,90,1126
+2014-11-07,cfr,40.9,52.1,42.9,26.0,27.1,23.7,22.8,15.7,57.1,32.4,28.1,50.0,13.8,15.7,26.3
+2014-11-07,etc_new_admission,13,,,,,,,,,7,,,,,20
+2014-11-07,etc_currently_admitted,54,,,,,,,,,49,,,,,103
+2014-11-07,etc_cum_admission,1006,,,,,,,,,114,,,,,2187
+2014-11-07,etc_new_deaths,1,,,,,,,,,2,,,,,3
+2014-11-07,etc_cum_deaths,252,,,,,,,,,34,,,,,729
+2014-11-07,etc_new_discharges,3,,,,,,,,,2,,,,,5
+2014-11-07,etc_cum_discharges,260,,,,,,,,,50,,,,,836
+2014-11-07,cum_contacts,2539,3170,735,651,255,2625,2869,7074,1103,1124,1157,125,5858,3733,33018
+2014-11-07,cum_completed_contacts,2182,2742,390,189,8,1697,1177,948,961,848,845,125,3365,1867,17344
+2014-11-07,contacts_followed,357,316,345,462,247,928,1692,6126,135,276,312,0,2502,1866,15564
+2014-11-07,new_contacts,0,0,0,0,0,0,64,57,0,0,0,0,0,0,121
+2014-11-07,contacts_healthy,357,316,337,462,247,924,1689,6082,135,276,310,0,2009,1630,14774
+2014-11-07,contacts_ill,0,0,8,0,0,0,3,14,0,0,0,0,0,0,25
+2014-11-07,contacts_not_seen,0,0,0,0,0,4,0,30,0,0,2,0,200,4,240
+2014-11-07,new_completed_contacts,0,17,31,0,0,0,0,0,0,0,0,20,0,0,68
+2014-11-07,percent_seen,100%,100%,98%,100%,100%,98%,100%,98%,100%,100%,100%,100%,98%,98%,98%
+2014-11-07,total_lab_samples,,,,,,,,,,,,,,,178
+2014-11-07,repeat_samples,,,,,,,,,,,,,,,33
+2014-11-07,new_samples,,,,,,,,,,,,,,,145
+2014-11-07,new_positive,,,,,,,,,,,,,,,45
+2014-11-07,new_negative,,,,,,,,,,,,,,,88
+2014-11-07,pending,,,,,,,,,,,,,,,12
+2014-11-07,positive_corpse,0,0,0,0,1,2,0,2,0,1,2,0,3,2,13
+2014-11-07,negative_corpse,0,11,0,0,0,10,0,2,0,16,0,0,25,2,66
diff --git a/sl_data/2014-11-07.csv b/sl_data/2014-11-07.csv
diff --git a/sl_data/2014-11-08-v165.csv b/sl_data/2014-11-08-v165.csv
@@ -0,0 +1,38 @@
+date,variable,Kailahun,Kenema,Kono,Kambia,Koinadugu,Bombali,Tonkolili,Port Loko,Pujehun,Bo,Moyamba,Bonthe,Western area urban,Western area rural,National
+2014-11-08,population,465048,653013,325003,341690,335471,494139,434937,557978,335574,654142,278119,168729,1040888,263619,6348350
+2014-11-08,new_noncase,0,7,4,3,0,12,8,76,0,8,11,0,47,14,189
+2014-11-08,new_suspected,0,0,0,1,0,0,4,4,0,0,1,0,7,3,20
+2014-11-08,new_probable,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
+2014-11-08,new_confirmed,1,0,3,2,0,10,20,21,0,0,14,0,18,22,111
+2014-11-08,cum_noncase,312,898,97,32,50,421,134,367,13,270,106,4,1007,498,4209
+2014-11-08,cum_suspected,18,98,61,11,14,87,45,85,10,77,35,3,107,59,710
+2014-11-08,cum_probable,32,0,1,0,32,6,4,1,0,1,1,0,1,0,79
+2014-11-08,cum_confirmed,558,493,45,52,48,648,261,596,28,188,135,2,778,601,4433
+2014-11-08,death_suspected,4,4,2,6,0,22,4,74,3,8,9,1,8,12,157
+2014-11-08,death_probable,35,0,19,9,32,19,21,1,2,43,20,1,4,2,208
+2014-11-08,death_confirmed,228,257,18,13,14,153,55,89,16,62,34,1,102,91,1133
+2014-11-08,cfr,40.9,52.1,40.0,25.0,29.2,21.1,14.9,57.1,33.0,25.2,50.0,13.1,15.1,25.6,
+2014-11-08,etc_new_admission,12,,,,,,,,,4,,,,,16
+2014-11-08,etc_currently_admitted,56,,,,,,,,,46,,,,,102
+2014-11-08,etc_cum_admission,1018,,,,,,,,,118,,,,,2203
+2014-11-08,etc_new_deaths,0,,,,,,,,,1,,,,,1
+2014-11-08,etc_cum_deaths,252,,,,,,,,,35,,,,,730
+2014-11-08,etc_new_discharges,5,,,,,,,,,5,,,,,10
+2014-11-08,etc_cum_discharges,265,,,,,,,,,55,,,,,846
+2014-11-08,cum_contacts,2653,3170,735,651,255,2626,2869,6987,1103,1124,1157,125,6174,4015,33644
+2014-11-08,cum_completed_contacts,2184,2761,359,189,8,1681,1177,947,961,911,845,125,3631,2108,17887
+2014-11-08,contacts_followed,469,298,382,462,247,944,1628,6040,135,213,312,0,1965,1796,14891
+2014-11-08,new_contacts,0,0,0,0,147,0,0,0,0,0,31,0,28,60,266
+2014-11-08,contacts_healthy,469,298,376,457,247,940,1692,6030,135,209,312,0,1875,1734,14774
+2014-11-08,contacts_ill,0,0,2,5,0,4,1689,5,0,3,0,0,6,0,1714
+2014-11-08,contacts_not_seen,0,0,4,0,0,0,3,5,0,1,0,0,66,2,81
+2014-11-08,new_completed_contacts,0,0,0,0,0,0,0,0,0,0,0,0,35,84,119
+2014-11-08,percent_seen,100%,99%,98%,100%,99%,98%,100%,98%,100%,100%,100%,100%,98%,98%,98%
+2014-11-08,total_lab_samples,,,,,,,,,,,,,,,346
+2014-11-08,repeat_samples,,,,,,,,,,,,,,,26
+2014-11-08,new_samples,,,,,,,,,,,,,,,320
+2014-11-08,new_positive,,,,,,,,,,,,,,,111
+2014-11-08,new_negative,,,,,,,,,,,,,,,189
+2014-11-08,pending,,,,,,,,,,,,,,,20
+2014-11-08,positive_corpse,1,0,2,0,0,4,4,1,0,0,1,0,11,9,33
+2014-11-08,negative_corpse,0,7,2,0,0,1,5,7,0,5,6,0,37,9,79
diff --git a/sl_data/2014-11-08.csv b/sl_data/2014-11-08.csv
diff --git a/sl_data/2014-11-09.csv b/sl_data/2014-11-09.csv
diff --git a/sl_data/2014-11-10-v167.csv b/sl_data/2014-11-10-v167.csv
@@ -0,0 +1,41 @@
+date,variable,Kailahun,Kenema,Kono,Kambia,Koinadugu,Bombali,Tonkolili,Port Loko,Pujehun,Bo,Moyamba,Bonthe,Western area urban,Western area rural,National
+2014-11-10,population,465048,653013,325003,341690,335471,494139,434937,557978,335574,654142,278119,168729,1040888,263619,6348350
+2014-11-10,new_noncase,0,10,0,1,1,1,5,11,3,11,0,0,48,22,113
+2014-11-10,new_suspected,0,0,0,0,0,0,1,9,0,1,0,0,18,3,32
+2014-11-10,new_probable,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
+2014-11-10,new_confirmed,0,0,0,1,7,2,8,19,0,4,0,0,31,22,94
+2014-11-10,cum_noncase,315,922,97,37,51,433,144,402,16,296,110,4,1083,547,4457
+2014-11-10,cum_suspected,18,98,61,11,14,87,46,122,10,79,35,3,147,67,798
+2014-11-10,cum_probable,32,0,1,0,32,6,4,1,0,1,1,0,1,0,79
+2014-11-10,cum_confirmed,558,493,45,53,55,659,281,644,28,193,137,2,838,631,4617
+2014-11-10,death_suspected,4,4,2,6,0,22,4,74,3,8,9,1,8,12,157
+2014-11-10,death_probable,35,0,19,9,32,19,21,1,2,43,20,1,4,2,208
+2014-11-10,death_confirmed,228,257,19,14,17,155,57,92,16,62,35,1,104,92,1149
+2014-11-10,cfr,40.9,52.1,42.2,26.4,30.9,23.5,20.3,14.3,57.1,32.1,25.5,50.0,12.4,14.6,24.9
+2014-11-10,etc_new_admission,,,,,,,,,,,,,,,
+2014-11-10,etc_currently_admitted,,,,,,,,,,,,,,,
+2014-11-10,etc_cum_admission,,,,,,,,,,,,,,,
+2014-11-10,etc_new_deaths,,,,,,,,,,,,,,,
+2014-11-10,etc_cum_deaths,,,,,,,,,,,,,,,
+2014-11-10,etc_new_discharges,,,,,,,,,,,,,,,
+2014-11-10,etc_cum_discharges,,,,,,,,,,,,,,,
+2014-11-10,cum_contacts,2769,3170,771,651,255,3340,2869,7251,1103,1147,1372,125,6297,4085,
+2014-11-10,cum_completed_contacts,2243,2838,390,272,8,1681,1199,948,991,920,960,125,3830,2201,
+2014-11-10,contacts_followed,526,201,381,379,247,1759,1670,6303,105,192,412,0,1863,1673,
+2014-11-10,new_contacts,1,0,36,0,147,0,0,54,0,0,80,0,123,66,
+2014-11-10,contacts_healthy,526,201,369,379,247,1745,1670,6245,105,191,409,0,1700,1603,
+2014-11-10,contacts_ill,0,0,12,0,0,4,0,7,0,1,3,0,0,4,
+2014-11-10,contacts_not_seen,0,0,0,0,0,10,0,51,0,0,0,0,0,0,
+2014-11-10,new_completed_contacts,0,0,0,0,0,0,22,0,30,0,34,0,22,0,
+2014-11-10,percent_seen,100%,99%,98%,100%,99%,98%,100%,98%,100%,100%,100%,100%,98%,98%,
+2014-11-10,total_lab_samples,,,,,,,,,,,,,,,277
+2014-11-10,repeat_samples,,,,,,,,,,,,,,,38
+2014-11-10,new_samples,,,,,,,,,,,,,,,239
+2014-11-10,new_positive,,,,,,,,,,,,,,,94
+2014-11-10,new_negative,,,,,,,,,,,,,,,113
+2014-11-10,pending,,,,,,,,,,,,,,,32
+2014-11-10,positive_corpse,0,0,0,0,3,2,1,5,0,1,0,0,16,9,37
+2014-11-10,negative_corpse,0,10,0,0,0,1,4,7,3,11,0,0,36,19,91
+2014-11-10,pending,,,,,,,,,,,,,,,
+2014-11-10,positive_corpse,,,,,,,,,,,,,,,
+2014-11-10,negative_corpse,,,,,,,,,,,,,,,