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render_register_json is now working
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angelina-momin committed May 20, 2024
1 parent 2ed32c4 commit c2f386b
Showing 1 changed file with 3 additions and 5 deletions.
8 changes: 3 additions & 5 deletions R/utils_render_register.R
Original file line number Diff line number Diff line change
Expand Up @@ -110,7 +110,7 @@ add_repository_links_html <- function(register_table) {

add_repository_links_json <- function(register_table) {
register_table$`Repository Link` <- sapply(
X = register$Repository,
X = register_table$Repository,
FUN = function(repository) {
spec <- parse_repository_spec(repository)
if (spec[["type"]] == "github") {
Expand Down Expand Up @@ -248,13 +248,13 @@ render_register_html <- function(list_register_tables, md_columns_widths) {
render_register_json <- function(list_register_tables, register) {
for (register_table_name in names(list_register_tables)) {
register_table <- list_register_tables[[register_table_name]]
register_table$`Repository Link` <- add_repository_links_json(register_table)

# Get paper titles and references
titles <- c()
references <- c()

for (i in seq_len(nrow(register_table))) {
config_yml <- get_codecheck_yml(register_table[i, ]$Repo)
config_yml <- get_codecheck_yml(register_table[i, ]$Repository)

title <- NA
reference <- NA
Expand All @@ -266,10 +266,8 @@ render_register_json <- function(list_register_tables, register) {
titles <- c(titles, title)
references <- c(references, reference)
}

register_table$Title <- stringr::str_trim(titles)
register_table$`Paper reference` <- stringr::str_trim(references)
register_table$`Repository Link` <- add_repository_links_json(register_table)

output_dir <- determine_output_directory(register_table_name)
if (!dir.exists(output_dir)) {
Expand Down

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